KEGG   Porphyrobacter sp. YT40: E2E27_11305
Entry
E2E27_11305       CDS       T06153                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pot  Porphyrobacter sp. YT40
Pathway
pot00010  Glycolysis / Gluconeogenesis
pot00020  Citrate cycle (TCA cycle)
pot00260  Glycine, serine and threonine metabolism
pot00280  Valine, leucine and isoleucine degradation
pot00310  Lysine degradation
pot00380  Tryptophan metabolism
pot00620  Pyruvate metabolism
pot00630  Glyoxylate and dicarboxylate metabolism
pot00640  Propanoate metabolism
pot00785  Lipoic acid metabolism
pot01100  Metabolic pathways
pot01110  Biosynthesis of secondary metabolites
pot01120  Microbial metabolism in diverse environments
pot01200  Carbon metabolism
pot01210  2-Oxocarboxylic acid metabolism
pot01240  Biosynthesis of cofactors
Module
pot_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pot_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pot_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pot_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pot00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    E2E27_11305 (lpdA)
   00020 Citrate cycle (TCA cycle)
    E2E27_11305 (lpdA)
   00620 Pyruvate metabolism
    E2E27_11305 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    E2E27_11305 (lpdA)
   00640 Propanoate metabolism
    E2E27_11305 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    E2E27_11305 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    E2E27_11305 (lpdA)
   00310 Lysine degradation
    E2E27_11305 (lpdA)
   00380 Tryptophan metabolism
    E2E27_11305 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    E2E27_11305 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pot04147]
    E2E27_11305 (lpdA)
Enzymes [BR:pot01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     E2E27_11305 (lpdA)
Exosome [BR:pot04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   E2E27_11305 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 NAD_binding_8 FAD_oxidored HI0933_like GIDA FAD_binding_3 DAO Thi4 Lys_Orn_oxgnase AlaDh_PNT_C 2-Hacid_dh_C 3HCDH_N UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: QDH34857
LinkDB
Position
complement(2413179..2414591)
AA seq 470 aa
MANQYDVIVLGSGPGGYVAAIRCAQLGLKTAIVERENLGGICLNWGCIPTKAMLRSAEIF
HYMQHAGDYGLKVAGQIEADLAAIVKRSRGVAKQLNQGVTHLMKKNKITVHMGEGALTGA
NSLTVKGEKGEEQLTAKHIIVATGARARDLPFAKADGKRVWTYRHAMTPAELPEKLLVIG
SGAIGIEFASFYNDLGSEVTVVEMLDRIVPVEDADVSTFLEKSLKKQGITIMTGAGVEGI
TVSDKGIKAKIKAKDGKVAESDFTHVIVAIGIVPNTENIGIDKLAEMDRGFIQIDPYGRT
KSKGLWAIGDCTPGPWLAHKASHEGVTAAEAIAKELGNTEVHPHPLNRNNIPGCTYCHPQ
IASVGLTEAKAKEAGYEVRVGNFPFIGNGKAIALGEAEGFIKTVFDAKTGELLGAHMVGA
EVTELIQGYTVGKTLETTEAELMQTVFPHPTLSEMMHESVLDAYGRALHF
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggctaatcaatatgacgtgatcgtgctcggctcgggccccggtggctatgtcgcggcg
atccgctgcgcgcagcttgggctcaagaccgcgatcgtcgagcgcgagaatctgggcggt
atctgcctcaactggggctgcatcccgaccaaggcgatgctgcgctcggcggagatcttc
cactacatgcagcacgcgggcgattatggcctgaaggtcgcaggccagatcgaggctgac
ctcgccgcgatcgtcaagcgcagccgcggggtcgccaagcagctcaatcagggcgtgacg
cacctgatgaagaagaacaagatcaccgtccatatgggcgagggcgcgctgaccggcgca
aacagcctgacggtgaaaggcgaaaagggcgaggagcaactcaccgccaagcatatcatc
gtcgccaccggcgcccgcgcgcgcgacctgcctttcgccaaggcggacggcaagcgcgtg
tggacctatcgtcacgcgatgaccccggcggaactgcccgaaaagctgttggtgatcggt
tcgggtgccatcggcatcgaattcgcgagcttctacaatgacctcggcagcgaggtgacg
gttgtggaaatgctcgaccggatcgtgccggtggaggatgcggacgtctcgaccttcctc
gagaagagcctcaagaagcaaggcatcacgatcatgaccggcgcaggagtcgagggaatc
accgtttcggacaagggcatcaaggccaagatcaaggcgaaggacggcaaggttgccgaa
agcgatttcacccacgtgatcgtcgccatcggcatcgtgcccaacaccgagaatatcggg
atcgacaagctggccgaaatggaccgtggcttcatccagatcgacccttatggccgaacc
aagtccaagggcctgtgggccatcggcgattgcacgcccgggccgtggctcgcacacaag
gcaagccacgagggcgtgaccgccgccgaggccatcgccaaggaactcggcaacaccgaa
gtccacccgcacccgcttaaccgcaacaacatcccgggctgcacctattgccacccgcag
atcgccagcgtcggcctgaccgaggccaaggcgaaagaggcgggctacgaggtccgcgtc
ggcaacttccccttcatcggcaatggcaaggcgattgcgcttggcgaggcagagggcttc
atcaagaccgtgttcgacgccaagaccggcgagttgctgggcgcgcacatggtcggcgcg
gaagtgaccgagctgatccagggctacaccgtcggcaagacgctcgagaccaccgaggcc
gagctgatgcagaccgtcttcccgcacccaacgctaagcgagatgatgcacgaaagcgtg
ctcgacgcctacggccgagcgctgcacttctga

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