Paralichthys olivaceus (Japanese flounder): 109630417
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Entry
109630417 CDS
T06037
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109630417 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109630417 (exosc5)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109630417 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
109630417
NCBI-ProteinID:
XP_019944173
LinkDB
All DBs
Position
Unknown
AA seq
238 aa
AA seq
DB search
MTSSILDTLVELNNDGGGVMEARGSSTVILREFGCEQNFLSQPDGSASFVHGDTSVYAGV
YGPAEVKVSKEIYDRATLEVLIQPKVGLPSVRERSQEQCVRETCEASLLLSLHPRSSLTL
ILQVLHDDGSLLSCLLNAACMALMDAGLPMSCLFCGVTCAIDADGQIITDPTAAQQKESR
ALMTFAIDGKQRNVLMSSTKGSFSVNELQQCIAVSQKASEKLFQFYRDSVRRRYSKTL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcatctatcctcgacacactcgtggaactgaataacgacggcggcggagtgatg
gaggcgcgtggttcttctaccgtgatcctgcgggagtttggctgtgaacagaactttctg
tctcaacctgacggctccgcatccttcgtccatggagacacaagtgtgtatgctggagtc
tatggaccggctgaggtcaaagtcagcaaggagatctatgaccgggcgacactggaggtg
ttgatacagcccaaagtgggacttccaagtgtaagggagcgatcacaggagcagtgtgtg
cgtgaaacctgtgaggcgtctctgcttttgtcacttcatcctcgctcctccctcacactc
attcttcaggtgctgcacgacgatggttcactcctgtcctgcttattgaatgcagcctgt
atggctcttatggacgcaggcctgcctatgagttgcctgttctgtggagtgacctgtgcc
attgacgcagatggtcagatcatcacagatcccactgcagctcagcaaaaggaaagtcga
gctctgatgacatttgctattgacggcaaacaacgcaatgtattgatgtcatcaaccaaa
ggatcgttttcagttaatgagctgcagcagtgtatagcagtcagtcagaaagcatcagag
aagctgttccagttctacagggactctgtgaggcggcgatactccaaaaccctctga
DBGET
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