Onion yellows phytoplasma OY-M: PAM_570
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Entry
PAM_570 CDS
T00154
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
poy
Onion yellows phytoplasma OY-M
Pathway
poy03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
poy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PAM_570 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
poy03032
]
PAM_570 (dnaB)
Enzymes [BR:
poy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PAM_570 (dnaB)
DNA replication proteins [BR:
poy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PAM_570 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
AAA_25
NACHT
TsaE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BAD04655
UniProt:
Q6YQ05
LinkDB
All DBs
Position
complement(638138..639634)
Genome browser
AA seq
498 aa
AA seq
DB search
MLTNEQKALKKLINYIEQGQWEKLNLYYQIINPKNLLNPKNKKIFTTLKYLFLEKQTTHP
WDKIKSQTEIIKELLTYLQTNFQQDNFTKESLSFLNNDFSKENNLDFLDNLKHTYTQEKL
FQQLLKIISPSFETQDPYTKNLYYHKIFDKLRNFISLIPQKNDKTLFNLNQMVFLHPEFF
DTDNQAKQKIQEEYYHLSEIFKGLNQSTKGLKKGQIITIGGYTGLGKTTFVYNLLLDIAK
TKHQESSHYPHILVFSYEMTMEENLSRLLAHQTQIPLDIILDKNFEDDNITPLKYTERMK
IAKQFFANINLSFSYDKSKILIISLILVYRLYLEKQVEIIVIDHLQITKASNRLENDRLA
IDEIMTKLKQLAMELNIVIIILSQFSRDTYSNYQGKSPEITALKGSGGIETNSDIVLMMS
EFQPKLSKDKEKPLNIYNSTLNQLYLESDDNENQKIIEVCIKKNRSGTKKTLIYHFEMTT
QTFQEIGYVLPYQIETYY
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgttaaccaacgaacaaaaagcgttaaaaaaactaataaattatatcgaacaaggccaa
tgggaaaaattaaacctttactaccaaataattaaccccaaaaatctacttaaccccaaa
aataaaaaaatatttacaactttaaaatatttatttttagaaaaacaaacaactcatcct
tgggataaaataaaatctcaaactgagataatcaaagagttattaacatatttacaaact
aatttccaacaagataactttaccaaagaatcattatcttttttaaataatgattttagt
aaggaaaataaccttgatttcttagataacttaaaacacacctatacccaagaaaaactg
ttccaacaactcttaaaaattattagtccttcttttgaaacccaagatccttacactaaa
aacttatattaccacaaaatctttgataaattaagaaattttatctctttaatcccccaa
aaaaatgataaaactctctttaatttaaaccaaatggtctttttacatcctgaatttttt
gacaccgataatcaagcaaaacaaaaaatccaagaagaatattaccacttatcagaaatt
tttaagggactcaaccaatccactaaaggattaaaaaaaggccaaatcatcactattggg
gggtatactggtttgggaaaaacaacttttgtctacaaccttcttttagatatcgccaaa
actaaacaccaagaaagctctcattatcctcatattttggtattttcttatgaaatgaca
atggaggaaaatttaagtcgtttattagcccaccaaactcaaattcccttagatattatt
ttagataaaaattttgaagatgacaatatcacacctctcaaatacacggaaaggatgaaa
atagcaaaacaattttttgccaacataaatttatcatttagttatgataaaagcaaaata
ttgattatatcattgattttagtttatcgcctctatttagaaaaacaagtagaaatcatc
gttatcgaccatctccaaattactaaagctagtaatcgtttagaaaatgaccgtctagcc
attgacgaaattatgactaaactcaaacaattagccatggaattaaacattgttattatt
attctctctcaattttcaagagatacatacagtaattaccaaggaaaatcccctgaaata
accgctttaaaaggaagtggtggaattgaaactaactccgatatcgtcttaatgatgtct
gaatttcaacctaaattatccaaagacaaagaaaaacctttaaatatttataattcaacc
ttaaatcaactctatttagaatctgatgacaatgaaaatcaaaaaataatcgaagtatgt
atcaaaaaaaatagaagtggcaccaaaaaaaccttaatttatcacttcgaaatgaccacc
caaacatttcaagaaatcggttatgttttaccttatcaaatagaaacttattattaa
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