Pontivivens ytuae: I0K15_04360
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Entry
I0K15_04360 CDS
T06919
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
poz
Pontivivens ytuae
Pathway
poz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
poz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I0K15_04360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poz03400
]
I0K15_04360
Enzymes [BR:
poz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
I0K15_04360
DNA repair and recombination proteins [BR:
poz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
I0K15_04360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QPH54992
UniProt:
A0A7S9LTF8
LinkDB
All DBs
Position
complement(923598..925019)
Genome browser
AA seq
473 aa
AA seq
DB search
MIRVALASETDFDGWRGAARALASNAVPSADVVWQVGEGGLFDTLSDPLPPMRGEVRVPK
AFVGLARNVICHRDSERFAKLYRILLCLQLQPGLLAHETDDDIRWLKACDKAIRRDLHKM
HAFVRFRKLGERDGREVFASWFEPSHRIEALTADFFVKRFTGMDWAIVTPEARIVWEGGQ
LSLGPGGTRDEVPEDDAIEDQWKSYFRSIFNPARLKPKAMQAEMPKKYWKNLPEAPLIPE
LMAEADSRAKAMQDAAPTLPTALTDRLKRGPVEHDIATLEGARKAAAACTRCPLHQDATQ
TVFGEGPADAKLMIVGEQPGDREDLAGRPFVGPAGELFDRALAEAGMERGTLHLTNAVKH
FKFIARGKRRIHQNPSTGEIEMCRWWLDLERELVRPKLILAMGASAARAVLGRKVTIRDA
RAREEDLGAARLRVTVHPSYLLRLPDDAARAEEYRWFVEDLRAAQARVEALAA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgggtcgcgctcgcctccgaaacggatttcgacgggtggcgcggggcggcgcgg
gcgctcgcctcgaacgcggtgccgtcggccgacgtggtctggcaggtgggggagggcggt
ttgttcgacacgctgtcggacccgctgccgccgatgcggggcgaggtgcgggtgcccaag
gcctttgtcgggctggcgcgcaacgtgatctgccaccgtgattccgagcggttcgcgaag
ctctaccgcatcctgctgtgtctgcagttgcagccggggctgctggcgcacgagaccgat
gacgacatccgttggctgaaggcgtgcgacaaggcgatccggcgtgacctgcacaagatg
cacgccttcgtccgctttcggaaactgggggagcgggacgggcgggaggtctttgccagc
tggttcgagccatcgcaccggatcgaggcgctgacggcggacttcttcgtgaagcgcttc
accggcatggactgggcgatcgtgacgcccgaggcgcggatcgtgtgggagggcgggcag
ctctccctcggccccggcggaacgcgcgacgaggtgccggaggacgatgcgatcgaggat
cagtggaagagctatttccgctcgatcttcaaccccgcgcggctgaagccgaaggcgatg
caggccgagatgccgaagaaatactggaagaacctgcccgaggcgccgctgatcccggag
ctgatggccgaggccgacagccgggcgaaggcgatgcaggatgcggcgcctacgctgccc
actgcgttgacggaccggttgaagcgcgggccggtggagcatgacatcgccacgctggag
ggcgcgcgaaaggcagcggcggcctgcactcgctgcccgctgcatcaggacgcgacgcag
acggtgttcggtgaggggccggcggatgcgaagctgatgatcgtgggggagcagcccggc
gaccgcgaggatctggccggccgccccttcgtgggccccgcgggcgaactcttcgaccgg
gcgctggcggaggcggggatggagcgcgggacgctccacctcaccaatgcggtgaagcac
ttcaagttcatcgcgcggggcaagcggcggatccaccagaaccccagcacgggcgagatc
gagatgtgccgctggtggctcgatctggagcgagagctggtgcgcccgaagctgatcctc
gccatgggcgcctcggccgcgcgggcggtgctggggcggaaggtcacgatccgggacgcg
cgggcccgggaggaggatctgggcgctgcccgcctgcgggtaacggtgcatccctcctac
ctgttgcgcctgccggacgacgcggcgcgggccgaggagtaccggtggttcgtggaggat
ctgcgggcagcgcaggcgcgggtcgaggcgctggccgcatga
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