Komagataella phaffii: PAS_FragB_0052
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Entry
PAS_FragB_0052 CDS
T01092
Name
(RefSeq) Translational elongation factor EF-1 alpha
KO
K03231
elongation factor 1-alpha
Organism
ppa
Komagataella phaffii
Pathway
ppa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PAS_FragB_0052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppa03019
]
PAS_FragB_0052
03016 Transfer RNA biogenesis [BR:
ppa03016
]
PAS_FragB_0052
03012 Translation factors [BR:
ppa03012
]
PAS_FragB_0052
04131 Membrane trafficking [BR:
ppa04131
]
PAS_FragB_0052
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppa04147
]
PAS_FragB_0052
Messenger RNA biogenesis [BR:
ppa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
PAS_FragB_0052
Transfer RNA biogenesis [BR:
ppa03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
PAS_FragB_0052
Translation factors [BR:
ppa03012
]
Eukaryotic type
Elongation factors
PAS_FragB_0052
Membrane trafficking [BR:
ppa04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
PAS_FragB_0052
Exosome [BR:
ppa04147
]
Exosomal proteins
Proteins found in most exosomes
PAS_FragB_0052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
8197493
NCBI-ProteinID:
XP_002490864
UniProt:
C4QZB0
LinkDB
All DBs
Position
1:2752575..2753954
Genome browser
AA seq
459 aa
AA seq
DB search
MGKEKLHVNVVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAEELGKGSFKYAWVL
DKLKAERERGITIDIALWKFETPKYHVTVIDAPGHRDFIKNMITGTSQADCAILVIASGI
GEFEAGISKDGQTREHALLAFTLGVKQLIVAINKMDSVKWSQKRYEEIVKETSNFIKKVG
YNPKTVPFVPISGWNGDNMIEPSSNCDWYKGWEKETKAGGATKGKTLLEAIDSIDPPSRP
TDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKAGMVVTFAPAGVTTEVKSVEMHHEQLEQ
GVPGDNVGFNVKNVSVKEIRRGNVCGDSKNDPPKAAESFNAQVIILNHPGQISAGYAPVL
DCHTAHIACKFDELIEKIDRRTGKKTEENPKFIKSGDAAIVKLVPSKPMCVEAFTDYPPL
GRFAVRDMRQTVAVGVIKSVVKTDKAGKVTKAAQKAAKK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggaaaagttgcacgttaacgtcgttgttattggacacgtcgatgctggtaaa
tctaccaccaccggtcacttgatctacaagtgtggtggtattgacaagcgtaccatcgag
aagtttgaaaaggaggctgaagagctcggtaagggatctttcaagtacgcctgggttttg
gacaagcttaaggctgagagagagagaggtatcaccatcgacatcgctttgtggaagttc
gagactccaaagtaccacgttaccgtcattgacgctccaggtcacagagatttcattaag
aacatgattaccggtacttcccaagccgactgtgccattttggtcattgcttccggtatt
ggtgagttcgaggctggtatctccaaggatggtcaaaccagagagcacgctcttttggct
ttcaccctgggtgtcaagcaattgattgttgccatcaacaagatggactccgtcaaatgg
tctcaaaagagatacgaggagattgtcaaggaaacttccaacttcatcaagaaggttggt
tacaaccctaagactgtcccattcgtcccaatttccggatggaacggtgacaacatgatt
gagccatcttccaactgtgactggtacaagggatgggagaaggagaccaaggctggtggt
gctaccaagggtaagaccttgttggaggctattgactccattgacccaccatccagacca
actgacaagcctctgagattgcctttgcaggatgtctacaagattggtggtatcggaact
gtgccagtcggtagagttgagaccggtgtcatcaaggctggtatggtcgtcactttcgcc
ccagctggtgtcactaccgaagtcaagtcggtcgagatgcaccacgagcaattggagcaa
ggtgtcccaggtgacaacgttggattcaacgtcaagaacgtttccgtcaaggaaatcaga
agaggtaacgtctgtggtgactccaagaacgacccaccaaaggccgctgaatctttcaac
gcccaggtcattatcttgaaccacccaggtcaaatctctgctggttacgctccagttttg
gactgtcacaccgctcacattgcttgtaagttcgacgagttgattgagaagattgacaga
agaaccggtaagaagactgaggagaaccctaagttcatcaagtccggtgacgccgctatc
gtcaagttggtcccatctaagccaatgtgtgttgaggccttcactgactacccaccttta
ggaagattcgctgtcagagacatgagacaaactgttgctgtcggtgttatcaagtccgtt
gtcaagactgacaaggctggtaaggtcaccaaggctgctcaaaaggccgctaagaaatag
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