Komagataella phaffii: PAS_chr1-3_0257
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Entry
PAS_chr1-3_0257 CDS
T01092
Name
(RefSeq) 3-methyl-adenine DNA glycosylase involved in protecting DNA against alkylating agents
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ppa
Komagataella phaffii
Pathway
ppa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PAS_chr1-3_0257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppa03400
]
PAS_chr1-3_0257
Enzymes [BR:
ppa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PAS_chr1-3_0257
DNA repair and recombination proteins [BR:
ppa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PAS_chr1-3_0257
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
8196489
NCBI-ProteinID:
XP_002489602
UniProt:
C4QVP8
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Position
1:complement(join(474086..474619,474709..475011))
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AA seq
278 aa
AA seq
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MSKINLLATRNQIKIRKAMSKRSIRQVKAAVANGHTNGKVSAPPLALPTEFISYHDAHFI
KAVEHLLKIDNTLYDSVVQGPFERFKKKRQILLPMIWATTSAGGELTQYRLVAEEDATVM
RGLGLSARKVQYTKDIARAFIEEEDSLLEFFFECSEEELFKKMIAWKGIGPWSVTMFSVF
SLNKMDCFTVLDLGVVRGASKYLQARPELLAELKDEVAQLEKTKKKKAKKQAVSSNKKWI
AVDEQIIERLAERFQPYRTALMVMFWRIGSVDLQVLES
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagattaacctacttgccaccagaaatcaaatcaagattcggaaagcaatgagt
aagagaagcatcagacaggtgaaagctgcagtggcaaatggacacacgaatggcaaagtt
tcagcgccgcctttagccctaccaactgagttcatctcttatcatgatgctcactttatt
aaggctgttgagcatcttctgaaaattgacaataccctttatgactcagtggttcaaggc
ccatttgagagatttaaaaaaaagaggcagatcctgttgccaatgatttgggctactact
tcagctgggggagaattaacccaatacagattggtggcagaagaagacgctacggtaatg
cgtgggttagggttatccgccagaaaagttcaatatacgaaggacattgcaagagctttt
attgaagaagaagacagtcttttggagttcttcttcgaatgctcagaggaggagttgttt
aagaagatgattgcgtggaaaggtattggaccatggtcggtgactatgttttcagtgttc
tctttgaacaaaatggactgtttcactgtcctggacttaggagtagttagaggagcctcc
aagtatcttcaggcaagacctgaactcctagcagaattgaaagacgaagtagcacagctg
gagaagacaaagaaaaaaaaggcaaaaaaacaggccgtttcatccaacaagaaatggatt
gcggttgatgaacagattatagaacgtttagctgaaaggttccaaccatatcgcacagct
ttaatggttatgttttggagaattggcagtgttgacttgcaagtactagaaagctaa
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