Komagataella phaffii: PAS_chr2-2_0407
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Entry
PAS_chr2-2_0407 CDS
T01092
Name
(RefSeq) Beta subunit of succinyl-CoA ligase, which is a mitochondrial enzyme of the TCA cycle
KO
K01900
succinyl-CoA synthetase beta subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
ppa
Komagataella phaffii
Pathway
ppa00020
Citrate cycle (TCA cycle)
ppa00640
Propanoate metabolism
ppa01100
Metabolic pathways
ppa01110
Biosynthesis of secondary metabolites
ppa01200
Carbon metabolism
Module
ppa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PAS_chr2-2_0407
00640 Propanoate metabolism
PAS_chr2-2_0407
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppa04147
]
PAS_chr2-2_0407
Enzymes [BR:
ppa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
PAS_chr2-2_0407
6.2.1.5 succinate---CoA ligase (ADP-forming)
PAS_chr2-2_0407
Exosome [BR:
ppa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
PAS_chr2-2_0407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
GARS_A
DUF2922
Motif
Other DBs
NCBI-GeneID:
8199113
NCBI-ProteinID:
XP_002491782
UniProt:
C4R1X8
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All DBs
Position
2:1631698..1632936
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AA seq
412 aa
AA seq
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MYRLFNRSVIRPFAQQRRCLSIHEYRSADLLRAYDVPVPRGGAADSPEEAYKIAQNLHSD
GLVIKAQALTGGRGKGHFDSGLQGGVKLVSTPEEVRDLAGQMLQHNLITKQSGAAGKLVS
AVYVVERKDAVHEAYLAILVDRVSQKPAIVVSSQGGMDIEGVAAKDPSAIKTFPIDLKTG
VTDSLAAEIASNLGFSPEAQVNAQDSIKKLYQIFMEKDATQIEINPLSEVSGNEVLCMDA
KFGFDDSALFRHSDVESWRDPTQEDADEVEAGKWGLNFIKLDGNIGCLVNGAGLAMATMD
IIKLYGGEPANFLDCGGGATPESIEKAFRLILTEDKVKGIFVNIFGGIVRCDYVAQGLIA
ATKSLDLSIPVVVRLNGTNLSQAEKLIEESGLKLYSFKDLDPAAEKIVELTK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgattattcaatcgatctgtgataagaccttttgctcagcaaagacgttgctta
tcaattcatgagtatcgttctgctgacttgcttcgtgcttatgatgtaccagttcctcgt
ggaggtgctgccgatagcccagaggaggcatataaaatcgcccagaacttgcattcagat
ggtctagtaataaaggctcaagcattgactggtggtcgtggaaaaggtcattttgattct
ggtctacaaggcggtgtcaagttggtttcgactccagaagaagtacgtgacttggcaggc
cagatgttgcagcacaatctgatcactaaacaatccggcgccgcaggtaaacttgtttcc
gctgtgtatgttgttgaacgtaaggatgcagttcatgaggcttacttggctattctggtg
gacagggtttctcagaagcctgcaattgttgtttcatcgcagggtggtatggatatagaa
ggtgttgctgctaaagatcctagcgctatcaaaactttcccaattgacttgaaaactggt
gtcaccgattcattggcggccgaaattgcctccaacctaggtttttctcctgaggcacag
gtcaatgcccaagattccattaagaaattgtaccaaatcttcatggagaaagatgctact
cagatcgaaattaatccattgtcagaagtctcaggcaatgaagtactttgcatggatgct
aagtttggatttgacgattccgcattatttagacattctgatgtggagtcgtggagggac
cccacacaggaggacgctgatgaagtggaggctggcaaatggggccttaactttatcaag
cttgatggtaatataggttgtctagtaaatggtgctggattggcaatggccacaatggat
attatcaaactttatggaggtgaacctgctaactttttagattgcgggggaggtgctact
ccagagtctattgagaaggcctttcgcttgatcctcacggaagataaagtcaagggaatt
tttgtcaacatttttggcggtattgttcgttgtgattatgttgcgcagggtctgattgca
gccacaaagtcgctcgatttaagtatccctgttgttgtcagacttaatggtaccaatctt
tctcaagctgaaaaattgattgaagagtcgggtcttaaactgtattctttcaaagattta
gatcctgctgctgagaaaattgttgaactaacaaaatga
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