Palaeococcus pacificus: PAP_04055
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Entry
PAP_04055 CDS
T03210
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
ppac
Palaeococcus pacificus
Pathway
ppac03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ppac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PAP_04055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppac03032
]
PAP_04055
Enzymes [BR:
ppac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
PAP_04055
DNA replication proteins [BR:
ppac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
PAP_04055
Elongation factors (archaeal)
PAP_04055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
CPL
DUF6568
Motif
Other DBs
NCBI-ProteinID:
AIF69228
UniProt:
A0A075LXE3
LinkDB
All DBs
Position
699733..700422
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AA seq
229 aa
AA seq
DB search
MKLGGIDEAGRGPVIGPLVIATVVVDEKNLDRLRELNVRDSKKISPKRREELFNKIIEIL
DDYVVIELWPEEIDNRNGTLNEFEVENFIKALNSLKIKPEVLYIDAADVKEERFGEVIKK
KLDFSPKIVSEHKADDKYLPVSAASILAKVTRDRAIEKLKEEYGEIGSGYPSDPRTRKFL
EEYYLKYGDFPPIARRTWKTLKKLEEKLKPKLQKSSKKDGQLNITEFLR
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgggaggaattgatgaagctgggagaggaccagttatagggccattggttatt
gctacggtagtggtggatgaaaagaatttagacagacttagggaactcaatgtgagagac
tccaagaaaataagccccaaacgaagggaagagctctttaataaaataattgaaattttg
gatgattatgtagttattgaactatggccggaggagattgataataggaatggcacttta
aacgagtttgaagttgagaacttcataaaagctctaaattcgctaaagattaaaccagag
gtgctatatatagatgcagctgacgtcaaggaagagcggtttggtgaagtgattaaaaag
aagctggacttttctccaaagatagtctcggagcacaaagcggatgataagtacctgccg
gtttccgctgcatctattttagctaaagtaactcgtgatagggcaattgaaaaactgaaa
gaagagtatggggagattggcagtggatatccaagcgatccaagaacaaggaagttcttg
gaagaatattacctcaagtatggcgattttcccccgatagctaggagaacatggaaaacc
ctaaaaaagcttgaagagaagttaaaacccaagctccaaaaaagctccaaaaaagatggt
caactcaatatcacggagttcctgcgttga
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