KEGG   Pteronotus mesoamericanus (Parnell's mustached bat): 129072925
Entry
129072925         CDS       T09558                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
ppam  Pteronotus mesoamericanus (Parnell's mustached bat)
Brite
KEGG Orthology (KO) [BR:ppam00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ppam01009]
    129072925 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ppam03036]
    129072925 (KDM5B)
Enzymes [BR:ppam01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     129072925 (KDM5B)
Protein phosphatases and associated proteins [BR:ppam01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     129072925 (KDM5B)
Chromosome and associated proteins [BR:ppam03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    129072925 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2 zf-PHD-like
Other DBs
NCBI-GeneID: 129072925
NCBI-ProteinID: XP_054432486
LinkDB
Position
Unknown
AA seq 1544 aa
MDPVAAPPPGPRPAPPLGGPGPLGEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTG
ICKVRPPPDWQPPFACDVDKLHFTPRIQRLNELEAQTRVKLNFLDQIAKYWELQGSTLKI
PHVERRILDLFQLNKLVAEEGGFAAVCKDRKWTKIATKMGFAPGKAVGSHIRGHYERILN
PYNLFLSGDSLRCLQKPHLATDTKDKEYKPHDIPQRQSVPPSETCPPARRAKRMRAEAMN
IKIEPEETTEARTHNLRRRMGCPAPKYENEKELKTFVKQEPVEKNERVAESEREKPRSRP
KRAASAVDLYVCLLCGSGSDEDRLLLCDGCDDSYHTFCLVPPLHDVPKGDWRCPKCLAQE
CSKPQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEED
VTVEYGADIASKEFGSGFPVRDGKAKLSPEEEEYLDSGWNLNNMPVMEQSVLAHITADIC
GMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLESVMKKLAPE
LFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAV
NFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKAHVLDVVVASTVQKDMAIMVE
DEKALRETARQLGVIDAERMDFELLPDDERQCIRCKTTCFMSAVSCACSPGLLVCLHHVR
ELCACPPRRYKLRYRYTLDDLYPMMNALKLRAESYNEWALNVNDALEAKINKKKSLASFK
ALIEESEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGKSPNQLTVS
ELRQFVTQLHALPCVLSQTPLLKGLLSRVEEFQRHSQKLLAEETPSAAELQDLLDVSFEF
DVELPQLAEMRVRLEQARWLEEVQQAYLEPSSLTLDDMRRLIDLGVGLAPCAAVEKAMAR
LQELLTVSEHWDDRAKSLLRARPRSSLSSLAAALKEMEGIPAYLPSGAALKDSVQRARDW
LQEVDALQAGGRVPVLDTLVELVARGRSIPVHLSSLPRLESLVAEVQAWKECAANTFLME
NSPYSLLEVLCPRCDVGPWGSKRKPRKVKEALPAGKKRSGRPGSLSDLERALAESRETAA
AMAALGAARRREMEALQSLRLANEGKLLSPAPAAGTTVCLCQQAPAAPMIQCELCRDAFH
AGCVAAPSAPQGPRVWLCPHCQRSEKPPLEKVLPLLASLQRLRVRLPEGDALRYVIERTV
SWQRRAQHLLSSGSLAAAHGRPGSGPPHGRWQASAGRATETSKVCQPPGTAPPSSPGDWD
DRASHFHAPFSTGWSCVPLHGVSPEVNELLMEAQLLQVTLPEIQDLYRTLRAKPSPAAQT
DRSSPARPGSEKNECCRGKREGVSSLERTPKRRLDREGLARERWDRAREARTPRRKKVRL
SHPPDTDALRLERARSCECARPADARSLPSDTSHSEQEDSEDEDAICPAGSCLQPEGDEV
DWVQCDGSCNRWFHQVCVGVSPEMAEKEDYVCVRCTGKDAPSRK
NT seq 4635 nt   +upstreamnt  +downstreamnt
atggatccggtcgccgcgccgcctcccggcccgcgccccgcgccgccgctcgggggcccc
ggcccgctgggcgagttcctgccgccgcccgagtgtccggtgttcgagcccagttgggag
gagttcgccgacccgttcgctttcatccacaagatccggcccatcgccgagcagacgggc
atctgtaaggtgcggccgcccccggactggcagcctccgttcgcgtgcgacgtggacaag
cttcacttcaccccgcgcatccagaggctcaatgaactggaggctcagacgcgcgtgaag
ctgaacttcctggaccagattgcgaagtactgggagttgcagggcagcaccctgaaaatc
ccccacgtggagcggaggatcttggacttgtttcagctgaacaagttagttgcagaagaa
ggtggatttgcagctgtttgcaaggacagaaaatggaccaaaattgccaccaagatgggg
tttgctcccggcaaagctgtgggctcccacatcagagggcactacgagcggatcctcaac
ccctacaacctgttcctgtcgggagacagcctgaggtgcctgcagaagccgcacctggcc
accgacacgaaggacaaggagtacaagccccacgacatcccccagcggcagtcggtgccg
ccctcggagacgtgcccgcccgcccgccgagccaagcgcatgagagccgaggccatgaac
attaagatagaaccagaagagacaacggaagccaggactcataacctcagacgtcggatg
ggctgcccggctccaaagtatgaaaatgagaaagagctgaagaccttcgtcaagcaggag
cccgtcgagaagaacgagcgcgtcgcggaaagcgagcgggagaagcccaggagccgaccg
aagagagccgccagcgccgtggacctgtacgtctgcctcttgtgtggcagcggcagcgac
gaggaccggctgctcttgtgcgacgggtgtgatgacagctaccacaccttctgcttggtc
ccgcccctgcacgatgttcccaagggagactggaggtgtcccaagtgtttggctcaggag
tgcagcaagcctcaggaggcatttggctttgagcaagcagcccgggactacaccctccga
acttttggggaaatggcagacgcgttcaagtctgattacttcaacatgcccgtccacatg
gttcccacagaactggttgagaaggaattttggcggctggtgagcaccattgaggaggac
gtcaccgtcgagtacggagccgacatcgcctcgaaggagtttggcagcggcttccctgtc
cgcgatgggaaggccaaactctccccggaggaagaggagtacctcgacagcggctggaat
ttgaacaacatgcccgtgatggagcagtcggtgctggcccacatcaccgctgacatatgc
ggcatgaagctgccctggctgtacgtgggcatgtgcttctcttcgttctgctggcacatc
gaggaccactggagctactcgatcaactacctgcactggggtgagccgaaaacctggtac
ggcgtccccggctacgccgccgagcagctggagagcgtgatgaagaagctggccccggag
ctcttcgtgtcccagccggacctgctgcaccagctggtgaccatcatgaaccccaacacc
ctgatgacgcacgaagtgcctgtttaccggaccaaccagtgtgctggggagtttgtgatc
acgttcccgcgcgcctaccacagcggcttcaaccagggcttcaacttcgcggaggctgtg
aacttctgcactgtggactggctgccgttaggccgacagtgtgtggagcactaccgcctg
cttcaccgctactgcgtgttctcgcacgacgagatgatctgcaagatggcctccaaggcc
cacgtgctggacgtcgtcgtggcctcgaccgtgcagaaggacatggccatcatggtggag
gacgagaaggcgctgcgggagaccgcgcgtcagctgggagtgatcgacgcagagagaatg
gacttcgagctcttgccggacgacgagcgtcagtgcatccggtgcaagacgacgtgcttc
atgtcggccgtctcgtgcgcctgctcgcccggcctgctggtctgcctgcaccacgtgcgg
gagctctgcgcctgcccgccccgcagatacaagctgcgatacaggtacaccctggacgac
ctctaccccatgatgaatgccctgaagcttcgggcagagtcttacaacgagtgggccttg
aacgtgaatgacgctctggaggcgaaaatcaacaagaagaaaagccttgccagcttcaag
gctttgatcgaagagtctgaaatgaagaagttcccggacaacgatcttctacgccacctt
cgcctggtcacgcaggacgcggagaagtgcgcctccgtcgcacagcagctgctcaacggc
aagaggcagaccagataccgatcgggcggaggaaaatccccaaaccagctcacggtgagc
gagctccggcagtttgtgacgcagctccacgctctcccgtgcgtcctcagccagacgccg
ctgctgaagggtcttctgagccgcgtggaagagttccagcggcacagccagaagctgctc
gccgaggagacgcccagcgctgccgagctgcaggacttgctggacgtcagcttcgaattt
gacgtggagctcccgcagctggctgagatgcgggtccgcctggagcaggcccggtggctg
gaggaggtgcagcaagcttacctggagcccagctccctcacgctggatgacatgcggcgg
ctcatcgacctgggcgtgggcctggccccgtgcgcggccgtggagaaggcaatggcgcgg
ctgcaggagctgctcacggtgtcggagcactgggacgaccgggccaagagccttctccga
gccaggccccggagctccctgagcagcctcgccgcggcgctgaaggagatggaggggatc
cccgcctacctgcccagcggggcggcgctgaaggactcggtgcagagggccagggactgg
cttcaggaggtggacgccctgcaggctggcggccgggtgccagtgctagacacgctggtg
gagctcgtcgcgcgaggccgctccatcccggtgcatctgagctccctcccgaggctggag
tcgctcgtagccgaagtccaagcttggaaagaatgtgccgctaacacgttcttgatggag
aattccccctactcgctcttggaggtgctgtgccctcgctgcgatgtcggcccgtgggga
tcgaagcggaagccgaggaaggtgaaggaggccttgcccgctgggaagaagcgaagcggc
aggccggggagcctgagcgacctggagcgggccctggcagagagcagggagacggccgcg
gcgatggcagccctcggggcggcgcgccggcgcgagatggaggccctgcagtccctgagg
ctggccaacgaggggaagctgctgtcgccggcccccgccgcgggcaccacggtctgcctg
tgccagcaggcccccgccgccccgatgatccagtgcgagctctgcagggacgctttccac
gcgggctgcgtggccgcgcccagcgctccgcaaggcccccgcgtctggctctgtccgcac
tgtcagcggtcggagaagccgcccctggagaaggtcctgccgctgctggcctcgctgcag
cgtctccgtgtgcgcctccccgagggggacgccctgcgctacgtgatcgagcggaccgtg
agctggcagcgccgggcccagcacctgctgtcgtcggggagcctcgcggccgcgcacggc
cgcccaggctccgggccgccacacggccgctggcaggcctcggccggacgggcgacggag
accagcaaggtgtgtcagcctccgggcacagcgcccccttcctcgcctggcgactgggac
gacagagcctcgcacttccacgctcccttctcgacaggatggagctgcgttcccctccat
ggtgtgagtccagaagtgaacgagctgctgatggaggcgcagctgctccaggtaaccctc
cctgagattcaggacctgtaccggacgttacgtgcaaagccaagccccgccgcgcagact
gaccgaagctcgccagcaaggcccggcagcgagaagaacgagtgctgccgcgggaagcga
gagggagtcagcagcctggagcggacgccgaagcgacgcctggacagagaaggcctcgcc
cgtgagcggtgggaccgagcgcgagaagcgcggacccccaggaggaagaaagtgagactg
agccaccccccggacacggacgctctccggttagagagggcgcgcagctgcgagtgcgcc
cgccccgcggacgcacgttccctgccgtcagacacgtcccattctgagcaggaggactct
gaggacgaagacgccatctgcccggcggggagctgcctgcagccggaaggagacgaggtg
gactgggtccagtgtgatggcagctgcaaccggtggttccaccaggtctgtgttggtgtc
tctcccgagatggcagagaaggaagactacgtctgtgtgcgctgtaccgggaaggacgca
ccaagccgaaaataa

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