Pteronotus mesoamericanus (Parnell's mustached bat): 129080225
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Entry
129080225 CDS
T09558
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain
KO
K06236
collagen type I alpha
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam04151
PI3K-Akt signaling pathway
ppam04510
Focal adhesion
ppam04512
ECM-receptor interaction
ppam04611
Platelet activation
ppam04820
Cytoskeleton in muscle cells
ppam04926
Relaxin signaling pathway
ppam04933
AGE-RAGE signaling pathway in diabetic complications
ppam04974
Protein digestion and absorption
ppam05146
Amoebiasis
ppam05165
Human papillomavirus infection
ppam05205
Proteoglycans in cancer
ppam05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
129080225 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129080225 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129080225 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129080225 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
129080225 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
129080225 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
129080225 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
129080225 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
129080225 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
129080225 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
129080225 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
129080225 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ppam00536
]
129080225 (COL1A1)
Glycosaminoglycan binding proteins [BR:
ppam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129080225 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
TILa
Motif
Other DBs
NCBI-GeneID:
129080225
NCBI-ProteinID:
XP_054441495
LinkDB
All DBs
Position
Unknown
AA seq
1459 aa
AA seq
DB search
MFSFVDLRLLLLLAATALQTHGQEEGQEEDIPPVTCVQNGIRYHDREVWKPEVCQICVCD
NGNVLCDDVICEDTKNCPGAVAPPGECCPVCPDGEVTPTDLETAGVEGPKGDTGPRGPRG
PAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKSAGVSVPGPMGPSG
PRGLPGPPGAPGPQGFQGPPGEPGEPGATGPMGPRGPPGPPGKNGDDGEAGKPGRPGERG
PPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRG
LPGERGRPGPPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGARGSEG
PQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPSG
PPGPKGNSGEPGAPGNKGDAGAKGEPGAPGIQGPPGPAGEEGKRGARGEPGPAGLPGPPG
ERGGPGGRGFPGADGVAGPKGPAGERGPPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPG
SPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPG
AVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPG
DLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGAQGAPG
LQGMPGERGAAGLPGPKGDRGDAGPKGADGAPGKDGARGLTGPIGPPGPAGAPGDKGETG
PSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAG
PAGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEG
GKGPRGETGPAGRPGEVGPPGPPGPAGEKGAPGADGPAGAPGTPGPQGIAGQRGVVGLPG
QRGERGFPGLPGPSGEPGKQGPSGPSGERGPPGPMGPPGLAGPPGESGREGSPGAEGSPG
RDGAPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPIGPVGARG
PAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPG
SPGAPGKDGLNGLAGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSFLPQPP
QEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKMC
HLDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPSVAQKNWYISKNPKEKKHVW
FGESMTGGSQFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTGNLK
KSLLLQGSNEIELRSEGNSRFTYTVTHDGCTSHTGTWGKTVIEYKTTKTSRLPIIDVAPL
DIGAPDQEFGIDIGPVCFL
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctccagacg
cacggccaagaggagggccaagaagaagacatcccaccagtcacctgcgtacagaacggc
atcaggtaccacgaccgagaagtatggaaacccgaggtctgtcagatctgtgtctgcgac
aatggcaacgtgttgtgtgatgacgtgatctgcgaggacaccaagaactgccccggcgcc
gtagcccccccgggcgagtgctgcccggtctgcccggacggcgaggtgacgcctacggac
ctagaaaccgcaggagtcgagggacccaaaggagacaccggcccccgaggccccagggga
cccgcaggcccccctggccgagatggcatccctggacagcctggactccccggacccccc
gggccccccggaccccccggaccccctggcctcggaggaaactttgctcctcaaatgtct
tatggctatgatgagaaatcagctggagtttccgtgcctggtcccatgggtccttctggt
cctcgtggtctccctggcccccctggcgcacctggtcctcaaggtttccaaggccctccc
ggtgagcccggcgagcctggggctacaggtcccatgggtccccgtggtccccctggccct
cctggcaagaacggagatgatggtgaagctggaaagcctggtcgccccggtgagcgtggg
cctcctggacctcagggtgctcggggattgcctggcacagctggtctccctggaatgaag
ggacacagaggtttcagtggtttggatggtgccaagggtgatgctggtcctgccgggccc
aagggggagcctggtagccctggtgaaaacggagctcctggtcagatgggtccccgtggt
ctgcctggtgaaagaggtcgccctggaccccctggccctgctggtgctcgtggaaatgat
ggtgctactggtgctgctggtccccccggtcccaccggtcctgctggccctcctggcttc
cctggtgctgttggtgctaagggtgaagctggtccccaaggagcccgaggctctgaaggt
ccccagggtgtgcgtggtgaacctggtccccctggccctgctggtgctgcaggccctgct
ggaaaccctggtgctgatggacagcctggtgctaaaggtgccaatggtgctcctggtatt
gctggtgctcctggtttccctggtgcccgaggcccctctggaccccagggccccagtggt
ccccccggtcccaagggtaacagcggtgaacctggtgctcctggcaacaaaggagatgct
ggtgccaagggagagcccggtgcccctggtattcaaggaccccctggccctgctggggag
gaaggaaagcgaggagcccgaggtgaacccggacctgccggcctgcccggaccccctggc
gagcgtggtggacccggtggccgtggtttccctggcgcggatggtgttgctggtcccaag
ggtcccgctggtgaacgtggtcctcctggccctgctggccccaaaggctctcctggtgaa
gccggtcgccccggtgaagctggtctgcctggtgccaagggtctgactggaagccctggc
agccccggtcctgacggcaaaactggcccccctggtcccgctggtcaagatggtcgcccc
ggacctccaggcccccccggtgcccgcggtcaggctggtgtgatgggattccccggacct
aaaggtgctgctggagagcccggtaaagctggagagcgaggtgttcctgggccccccggc
gctgtgggtcctgctggcaaagacggagaagctggagctcagggaccccctggccctgct
ggccccgctggtgagagaggtgaacaaggccctgctggctcccccgggttccagggtctc
cctggccccgctggtcctcctggtgaagcaggcaaacctggtgaacagggtgttcctgga
gacctcggtgcccctggcccctctggagcaagaggcgagagaggtttccctggcgagcgt
ggtgtgcaaggtcctcccggtcctgctggtccccgtggggccaacggtgcccctggcaat
gatggtgctaagggtgatgccggtgccccgggagcccctggtgcccaaggcgcccccggc
cttcagggaatgcctggtgaacgaggtgcagctggtcttccaggccctaagggtgacaga
ggcgatgctggtcccaaaggtgctgatggtgctcctggcaaagatggtgcccgaggtctg
actggccccatcggtcctcctggccctgctggtgcccctggtgacaagggtgaaactggt
cccagcggccctgctggtcccactggagctcgtggcgccccaggagaccgtggtgagcct
ggcccccccggccctgctggcttcgctggcccccctggtgctgatggccaacctggtgct
aaaggcgagcccggtgacgctggtgctaaaggcgatgctggcccccctggccctgctgga
cccgctggcccccccggccccattggtaacgttggtgctcctggacccaaaggtgctcgt
ggcagcgccggtccccctggtgctactggtttccctggtgctgctggccgagtcggtccc
cccggcccctctggaaatgctggaccccccggtcctcctggccctgctggcaaagaaggc
ggcaaaggcccccgtggtgagactggccctgctggacgtcctggtgaagtcggtccccct
ggtccccctggccctgctggtgagaaaggagcccctggtgcggatggacctgctggcgct
cccggtacccctggacctcagggtattgctggacaacgtggtgtggtcggcctgcctggt
cagcgaggagaaagaggcttccctggtcttcctggcccctctggtgaacctggcaaacaa
ggtccttctggacccagtggtgaacgtggcccccctggtcccatgggcccccctggattg
gctggaccccctggagagtctggacgtgagggatctcctggcgctgaaggctcccccgga
cgagacggtgctcctggcgccaaaggtgaccgtggtgagactggccctgctggaccccct
ggtgctcctggtgctcctggtgcccctggccccgtcggccctgctggcaagagtggcgac
cgtggcgagactggtcctgctggtcctgctggtcccatcggccccgttggtgcccgtggc
cccgctggaccccaaggcccccgtggtgacaagggtgagacaggcgaacagggcgacaga
ggcataaagggtcaccgtggcttctccggtctccagggtccccctggtcctcctggctct
cctggtgaacaaggtccctctggagcttctggtcctgctggtcctcgtggtccccccggc
tctcctggcgctcctggcaaagatggactcaacggtctcgcaggccccatcggcccccct
ggtccccgcggtcgcactggcgatgccggtcctgttggtccccccggccctcctgggcct
cctgggcctcccgggcctcccagcggcggtttcgacttcagcttcctgccccagccacct
caagagaaggctcacgatggcggccgctactaccgggccgatgatgccaacgtggtccgt
gaccgtgacctggaggtggacaccaccctcaagagcctgagccagcagatcgagaacatc
cggagccctgaaggcagccgcaagaacccagcccgcacctgccgcgacctcaagatgtgc
cacttggactggaagagcggagaatactggattgaccccaaccaaggctgcaacctggac
gccatcaaggtcttctgcaacatggagacaggggagacctgcgtgtaccccactcagccc
agcgtggcccagaagaactggtacatcagcaagaaccccaaggagaagaagcatgtctgg
ttcggcgagagcatgaccggcggatcccagttcgaatacggcggccagggctccgacccc
gccgatgtggccatccagctgaccttcctgcgcctgatgtccaccgaggcctcccagaac
atcacctaccactgcaagaacagcgtggcctacatggaccagcagacaggcaacctcaag
aagtccctgctcctccagggctccaacgagatcgagctccggtccgagggcaacagccgc
ttcacctacactgtcacccacgacggctgcacgagtcacaccggaacctggggcaagaca
gtgatcgaatacaaaaccaccaagacctcccgcctgcccatcatcgatgtggcccccttg
gacattggcgccccagaccaggaattcggcatcgacattggccctgtctgcttcctgtga
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integrated database retrieval system
