Pteronotus mesoamericanus (Parnell's mustached bat): 129082025
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Entry
129082025 CDS
T09558
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppam03000
]
129082025 (RC3H1)
04121 Ubiquitin system [BR:
ppam04121
]
129082025 (RC3H1)
Transcription factors [BR:
ppam03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
129082025 (RC3H1)
Ubiquitin system [BR:
ppam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129082025 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
PaaA_PaaC
Baculo_IE-1
Vesi_VP2
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
129082025
NCBI-ProteinID:
XP_054443716
LinkDB
All DBs
Position
Unknown
AA seq
1129 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPVTLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLTRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPAAAVLPDE
GTVDLPSRKPPALPNGIVSAGNTVTQLIPRGTDPSYDSSLKPGKTDHLSSSAPGSPPDLL
ESVPKSIPALAVNPHPVPPRGPTDLPPMPVTKPLQMVPRGPQLYPAQQADVYCQDPRGAA
PPFEPAPYQQGMYYTAPQCVSRFVRPPPSAPEPAPPYLDHYSPYLPDRVINPPYGTQPHQ
YPPMYPPHCDGRRVYPAQSYPREEIFRESSIEIPPPAVPSYVPESRERYQQAEGYYPVAP
HPTQIRSSYIREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLP
PTFHPEEFLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSAEMMNV
ESKGVRDQRLDHQRRATETSDDDLIPFGDRPTVSRFGAISRTSKTMYQGAGPLQAMAPQG
APTNSINMPDCSPYGSHGGWGGSAYSPHQGAPSQAHFSDRERISMSEVASHGKPLPSADR
EQLRQELQQLNHQISQQTQLRGLEAVSNRLLLQREASALAGQPQRPPPPPKWPGMISSEQ
LSLELHQVEREIGKRTRELSMENQCSLDMKSKLNTSKQAENGQPDPQSRVPAEDLALTFS
DVPNGSALTQENINLLSNQASSLNLSEDPEGGGDNNDSQRSGVTPSPAP
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacagtggacggatttcctttcctgcccaatttgcactcagact
ttcgacgaaacaattcgaaagcccatcagcttgggttgtggccatactgtctgcaagatg
tgcctgaataaactccaccgcaaggcttgcccgttcgaccagaccactatcaacaccgac
atcgagctcctcccggtgaactcagccctgctgcagctcgtgggcgctcaggtccctgag
cagcagcccgttactctgtgtagtggggttgaagacacgaagcattatgaggaagccaag
aaatgtgtggaagaattagcgctgtacctgaagccactcagcagcgctagaggagtgggc
ctgaatagcactactcagagtgttctgagtcgcccgatgcagaggaagctggtgactctg
gtccactgccagctagtggaagaagaaggcaggatccgtgccatgcgggcagctcgatct
ttaggtgaacgaacagtgacggagctcattctccagcaccagaacccgcaacagctctct
tctaacctttgggcggcggtcagggctcggggctgccagttcctcggaccagcaatgcag
gaagaagctctaaagctggttctcctggccttagaagatggttctgctttgtcaagaaaa
gtgttggttctctttgtggtgcaaaggttggagccccggtttcctcaagcctccaaaacg
agcattgggcacgttgtccagctcctgtatcgggcctcctgcttcaaggtcaccaaacgc
gatgaagactcttctctgatgcagctgaaggaagaatttagaacctacgaggctctgcgg
cgagaacacgactcccagatagtgcagattgcgatggaagctggcttacggattgcaccg
gaccagtggtcctccttgctttacggagaccagtctcacaaatcgcacatgcagtccatt
attgacaagttgcagactccagcctcttttgcacaaagtgttcaggaactaacaattgct
ctccagcggactggagatccagcaaacttgacccggctgagaccccatctggagctgtta
gcgaacattgaccctagcccagatgctcctccaccgacttgggaacagctagaaaatggg
ctggttgccgtgcgcacagtggtccacgggctggtggattacatccagaaccacagcaag
aagggagcggaccaacagcagcctccacagcatagcaaatacaaaacatacatgtgccga
gatatgaagcagagaggaggatgcccccgtggggccagctgtacgttcgcacactcccag
gaggaactggaaaaatttcgtaagatgaacaaacgcctggttcccagaaggccccttagc
gcctcgctgggtcagctgaatgaggtgggcctgcccgcggcagctgtcctcccagacgag
ggcaccgtggatctgcccagcagaaagccccccgctctgcccaacggcattgtgtcggca
gggaacacagtcacgcagctgatcccccgagggacggaccccagctacgattccagtctg
aagccggggaagaccgatcacctgagcagcagtgcccctgggtcccctcctgacctgcta
gaatctgtgcccaagagcattcctgccttagctgtgaatccacatcctgtacctccaagg
ggacccacagacctgcctcccatgcctgtcaccaagccgcttcagatggtgccgcggggc
cctcagctgtacccggcgcagcaggcagacgtctactgccaggaccctcggggggcggcc
ccgccatttgagccggcaccttatcagcagggcatgtactacacggcgccacagtgcgtg
tcccgcttcgtccggcccccgccatccgctccagagcccgccccgccctacctggatcat
tactcgccctacctcccggaccgcgtcataaacccgccgtacggcacgcagccacaccag
tacccacctatgtacccgcctcactgcgacggccgccgcgtctaccctgctcagtcttat
ccaagagaggagatcttccgagaaagttccattgagattccacctccagccgtgccatcc
tacgtaccggaatccagagagaggtaccagcaggcggagggttactacccagtggcccct
catccgactcagatcagatcttcgtacatccgagagccaccgtatagccggctccctcct
cctcctcagccccatcccagtctagatgagctgcatcgaagacgaaaggaaataatggcc
cagctagaggaaaggaaggttatctctcccccgcctttcgctccctcaccaacactgcct
cccaccttccacccagaggagtttttggatgaagacttgaaggtggctgggaaatacaaa
ggaaatgattatagccagtactctccctggtcatgtgacaccatcggctcctacattgga
accaaagatgcaaaacccaaagatgttgtggcagcagggagtgcggaaatgatgaatgtg
gagagcaaaggagtgagagaccagcgactggatcatcagagaagagcgacagaaaccagt
gatgacgacctcatcccgtttggagaccggccaacagtatcgcggtttggtgccatctct
cgaacttccaaaacaatgtatcagggtgctggcccgttacaggctatggcacctcaggga
gctcccacgaactctattaacatgccagactgcagtccctacggcagccacgggggctgg
ggcggctccgcctactcgcctcaccagggcgcgccctcccaggcgcacttcagcgacaga
gagagaatatccatgtcagaagtggccagtcatggaaaaccccttccctctgctgacagg
gagcagctacgacaagaattgcagcaactaaaccatcaaatcagtcaacagacccagctg
cgtggactggaggctgttagtaacaggctgctgttgcagagggaggcgagcgccctggca
ggccagccgcagcgccccccaccacctccgaagtggcctggaatgatctcaagtgagcag
ctgagcttggaactgcaccaagtggagcgggaaatcgggaagaggacccgggagctgagt
atggagaaccagtgttctctggacatgaaaagcaaactgaacacaagtaagcaagcagaa
aacggacagccagacccccaaagcagggttccagctgaggaccttgcattgacattcagt
gatgtaccaaatggatcggccttgacacaagagaacatcaacctcctatcaaaccaggcc
agctctctgaacctgtccgaggaccccgagggaggaggagacaacaacgactcccagaga
tcgggggtcacgcccagtcctgctccctga
DBGET
integrated database retrieval system
