Pseudomonas putida BIRD-1: PPUBIRD1_0981
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Entry
PPUBIRD1_0981 CDS
T01975
Symbol
gatB
Name
(GenBank) GatB
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb00970
Aminoacyl-tRNA biosynthesis
ppb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PPUBIRD1_0981 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ppb03029
]
PPUBIRD1_0981 (gatB)
Enzymes [BR:
ppb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
PPUBIRD1_0981 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
PPUBIRD1_0981 (gatB)
Mitochondrial biogenesis [BR:
ppb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PPUBIRD1_0981 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ADR58665
LinkDB
All DBs
Position
complement(1112676..1114121)
Genome browser
AA seq
481 aa
AA seq
DB search
MQWEVVIGLEIHTQLATQSKIFSGSATTFGSEPNTQASLVDLGMPGVLPVLNEQAVRMAC
MFGLAIDAEIGKRNVFARKNYFYPDLPKGYQISQMDLPIVGKGHLDIALEDGTIKRIGVT
RAHLEEDAGKSLHEDFSGSTGIDLNRAGTPLLEIVSEPDMRSAKEAVAYVKAIHALVRYL
GICDGNMAEGSLRCDCNVSIRPKGQPEFGTRCEIKNVNSFRFIERAINSEIQRQIDLIED
GGKVVQETRLYDPNKDETRSMRSKEEANDYRYFPDPDLLPVVIEDSFLETIRAGLPELPP
QKVERFQTQYGLSAYDANVLASSREQADYFEEVVKIGGDAKLAANWVMVELGSLLNKLGV
EIDQAPVSAAQLGAMLLRIRDNTISGKIAKTVFEAMAAGEGDADSIIESKGLKQVTDTGA
IDKMLDEMLAANAEQVEQYRAADEAKRGKMFGFFVGQAMKASKGKANPGQVNQLLKAKLE
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgggaagttgtgatcgggctggaaatccacactcagctcgccacccagtcgaag
atcttctccggcagcgctaccacctttggctccgagccgaatactcaggccagcctggtt
gacctgggcatgcccggtgtactgccggtgctgaacgagcaagccgtgcgcatggcgtgc
atgttcggcctggccatcgatgccgaaatcggcaagcgcaacgtgttcgcacgcaagaac
tacttctaccccgacctgcccaagggctaccagatcagccagatggacctgccgatcgtc
ggcaagggccacctggacatcgcgctggaagacggcaccatcaagcgcatcggcgtaacc
cgcgcgcacctggaagaagacgccggcaagagcctgcacgaagacttcagcggttccacc
ggcatcgacctgaaccgtgccggcactccgctgctggaaatcgtctccgagcctgacatg
cgcagtgccaaggaagccgtagcttacgtcaaggcgatccacgcgctggtgcgctacctg
ggcatctgcgacggcaacatggccgaaggttcgctgcgctgcgactgcaacgtatcgatc
cgcccgaaaggccagcccgagttcggcactcgctgcgaaatcaagaacgtcaactcgttc
cgtttcatcgagcgtgcgatcaacagcgaaatccagcgccagatcgacctgatcgaagac
ggtggcaaagtggtgcaggaaacccgcctgtacgacccgaacaaggacgaaacccgctcc
atgcgcagcaaagaggaagctaacgactaccgttacttccccgaccccgacctgctgccg
gtagtcatcgaggacagcttcctcgaaaccattcgcgccggcctgccggagctgccacca
cagaaggtcgagcgcttccagactcagtacggtctgtcggcctacgacgccaacgtgttg
gcttccagccgcgaacaggctgactacttcgaagaagtggtgaagatcggtggtgatgcc
aagctggcggccaactgggtcatggtcgaactgggtagcctgctgaacaagctgggtgtc
gaaatcgatcaggcgccggtcagcgccgcgcaactgggcgccatgctgctgcgcattcgt
gacaacaccatcagcggcaagattgccaaaaccgtgttcgaggccatggccgccggtgaa
ggcgatgccgacagcatcatcgagagcaagggcctgaaacaggttaccgacacgggtgcg
atcgacaagatgctcgacgaaatgctggcagccaatgccgagcaggtcgaacagtatcgc
gcagccgatgaggccaagcgcggcaagatgttcggcttcttcgtcggccaggccatgaaa
gcctccaaaggcaaggccaacccggggcaggtgaaccaattgctcaaagccaagctcgaa
gggtga
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