Pseudomonas putida BIRD-1: PPUBIRD1_1155
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Entry
PPUBIRD1_1155 CDS
T01975
Name
(GenBank) ATP-dependent DNA ligase
Organism
ppb
Pseudomonas putida BIRD-1
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
ADR58837
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Position
complement(1304635..1306293)
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AA seq
552 aa
AA seq
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MKAFATLFLRLDATTSSNAKLEALRDYFDMAPADDAAWAVYFLAGGRPRQLVPTRLLREL
ATTLAGLPDWLFEESYQAVGDLAETISLLLPLHADGNEEGLATWVEQHLLPLRGLAPEQV
RQRLPLLWARLDRASLMLCLKLITGSFRVGVSKLLVTRALAQLAGLDANRVAQRLVGYTD
IGHRPTAASYQRLIAPESADEHNQRGGQPYPFFLAHPLQVSSDQFHTLLGPPSDWQIEWK
WDGIRAQVVKRDGQLWVWSRGEELVTERFPELHGLAQTLPDGVVLDGEILVWKPGETEAE
LAVQPFALLQQRIGRKTLGKKLLNDAPVVLQAYDLLEWQGEDWRSRPQHERRSQLEHLVD
EHPLAPVLLSPMLQGPDWADLARQREQSRSLGVEGLMLKQREALYGVGRTKDMGIWWKWK
IDPFSVDAVLIYAQRGHGRRASLYSDYTFAVWDAPAGTPGRALVPFAKAYSGLSDEEMRK
VDAIIRKTTVETFGPVRSVTPTLVFELGFEGIALSRRHKSGIAVRFPRMLRWRLDKPVEE
ADDLATLQALLA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccttcgctacgctgttcctgcgcctggacgcgaccacctccagcaatgccaag
ctcgaggcactgcgggactatttcgacatggcgcctgccgacgatgctgcctgggcggtg
tatttcctggccggcgggcgcccacgccagctggtgcccacccgcctcctacgtgaactg
gcaacgacgctggctggcctgccggactggcttttcgaagaaagctatcaggccgtgggc
gacctggccgagaccatttcgctgctgctgccgctgcacgccgatggcaacgaggaaggc
ctggccacctgggtggaacagcatttgctgcccctgcgcgggttggcgcctgagcaagtc
cgccagcgcctgccgctgctctgggcccggttggaccgcgccagcctgatgctatgcctg
aagctgatcactggcagctttcgcgtgggcgtgtcaaagctgttggtcacccgcgccctg
gcgcaactggccgggctggacgccaatcgcgtggcccagcgcctggtcggctacaccgat
ataggccatcgcccgactgcagccagttaccagaggctgatcgccccagagtccgccgat
gaacacaaccagcgtggcggccagccctaccccttcttcctggcccatccgctgcaagtg
tccagcgatcaattccataccctgctcggtccaccaagcgattggcaaatcgaatggaag
tgggacggcattcgggcgcaagtggtgaagcgcgatggccagctgtgggtgtggtcacgc
ggcgaagaactggttaccgagcgtttccccgaactgcatggtctggcacagacgttgccc
gatggcgtggtgctcgatggcgagatcctggtctggaaacctggtgaaaccgaggcggaa
ctggccgtgcagccttttgccttgctgcaacagcgtatcggtcgcaaaacgctgggcaaa
aaactgctgaacgatgcgccggtggtgctgcaggcctacgacctgctggagtggcagggc
gaggactggcgcagccgaccgcaacacgaacgccgaagccagctggaacacctggtggat
gaacacccacttgcccccgtgctgttgtcgcctatgctgcaaggcccggactgggccgac
cttgcccgccagcgcgaacagtcacgcagcctgggcgtggaagggctgatgctcaagcag
cgcgaggccctgtacggcgtggggcgcaccaaggacatgggcatctggtggaagtggaag
atcgatcctttcagcgtcgatgcggtgctgatctatgcccaacgcggccacggccgcagg
gccagtctgtacagcgactacacctttgccgtatgggatgcaccggcaggtacccctggt
cgggcgttggtgccctttgccaaggcctattcagggctcagtgacgaagaaatgcgcaaa
gtcgacgccatcatccgcaagaccacggtggaaacgttcggcccggtgcgcagtgtcact
ccaacgttggtgttcgagctgggcttcgaaggcatcgccctgtcccggcgccacaaaagc
ggtattgccgtgcgctttccgcgcatgctgcgctggcggctggacaagccggtggaagaa
gcagatgacctggccaccctgcaggcgctactggcctga
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