KEGG   Pseudomonas putida BIRD-1: PPUBIRD1_2040
Entry
PPUBIRD1_2040     CDS       T01975                                 
Symbol
alr
Name
(GenBank) Alr
  KO
K25317  amino-acid racemase [EC:5.1.1.10]
Organism
ppb  Pseudomonas putida BIRD-1
Pathway
ppb00260  Glycine, serine and threonine metabolism
ppb00270  Cysteine and methionine metabolism
ppb00310  Lysine degradation
ppb00470  D-Amino acid metabolism
ppb01100  Metabolic pathways
ppb01120  Microbial metabolism in diverse environments
Module
ppb_M00960  Lysine degradation, bacteria, L-lysine => D-lysine => succinate
Brite
KEGG Orthology (KO) [BR:ppb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PPUBIRD1_2040 (alr)
   00270 Cysteine and methionine metabolism
    PPUBIRD1_2040 (alr)
   00310 Lysine degradation
    PPUBIRD1_2040 (alr)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PPUBIRD1_2040 (alr)
Enzymes [BR:ppb01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.10  amino-acid racemase
     PPUBIRD1_2040 (alr)
SSDB
Motif
Pfam: Ala_racemase_N Ala_racemase_C DUF5604
Other DBs
NCBI-ProteinID: ADR59688
LinkDB
Position
2300534..2301676
AA seq 380 aa
MDNGTNTLTVQNSNAWVEVSASALQHNIRTLQAELAGKSKLCAVLKADAYGHGIGLVMPS
IIAQGVPCVAVASNEEARVVRASGFTGQLVRVRLASLSELEDGLQYDMEELVGSAEFARQ
ADAIAARHGKTLRIHMALNSSGMSRNGVEMATWSGRGEALQITDQKHLKLVALMTHFAVE
DKDDVRKGLAAFNEQTDWLIKHAKLDRSKLTLHAANSFATLEVPEARLDMVRTGGALFGD
TVPGRTEYKRAMQFKSHVAAVHSYPAGNTVGYDRTFTLARDSRLANITVGYSDGYRRVFT
NKGHVLINGHRVPVVGKVSMNTLMVDVTDFPDVKGGNEVVLFGKQAGGEITQAEMEEING
ALLADLYTVWGSSNPKMLVD
NT seq 1143 nt   +upstreamnt  +downstreamnt
atggacaacggcaccaacaccctgaccgtgcagaacagcaacgcctgggttgaggtcagt
gccagcgctctgcaacacaatatccgcaccctgcaggccgagctggccggcaagtccaag
ctgtgcgctgtgctcaaggccgatgcctatggccacggtatcggcctggtaatgccatcg
atcatcgcccagggcgtgccctgcgtggcggtggccagcaacgaggaggcccgcgtggtc
cgcgccagtggcttcaccgggcaactggtgcgggtacgcctggccagcctcagcgagctg
gaagatggcttgcagtacgacatggaggagctggtgggcagcgcggaattcgcccgccag
gccgatgccatcgccgcgcgccatggcaagaccctgcgcattcacatggcgctcaactcc
agcggcatgagccgcaacggggtggagatggccacctggtccggccgtggcgaagcgctg
cagatcaccgaccagaagcacctcaagctggtcgcgctgatgacccactttgccgtggag
gacaaggacgatgtccgcaagggcctggcagccttcaacgagcagaccgactggttgatc
aagcacgcgaagctcgaccgcagcaagctcaccctgcacgccgccaactcgttcgctacg
ctggaggtgccggaagcgcgcctggacatggtgcgaacggggggcgcgctgttcggcgac
accgtgccggggcgcactgagtacaagcgtgcgatgcagttcaaatcgcatgtggcggcg
gtgcacagctatccggctggcaacaccgtgggctatgaccgcaccttcaccctggcccgt
gattcgcgtctggccaacattacggtcgggtactccgatggctaccgccgggtattcacc
aacaagggccatgtgctgatcaacggccaccgtgtgccggttgtgggcaaggtgtcgatg
aacacgctgatggtcgatgtcaccgacttccctgatgtgaaggggggcaacgaagtggtg
ctgtttggcaagcaggccgggggcgaaatcacccaggccgagatggaagaaatcaacggc
gcgttgctcgccgatttgtacaccgtatggggcagttccaacccgaagatgctcgtcgac
tga

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