Pseudomonas putida BIRD-1: PPUBIRD1_5063
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Entry
PPUBIRD1_5063 CDS
T01975
Symbol
dadX
Name
(GenBank) DadX
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb00470
D-Amino acid metabolism
ppb01100
Metabolic pathways
ppb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PPUBIRD1_5063 (dadX)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PPUBIRD1_5063 (dadX)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppb01011
]
PPUBIRD1_5063 (dadX)
Enzymes [BR:
ppb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
PPUBIRD1_5063 (dadX)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppb01011
]
Precursor biosynthesis
Racemase
PPUBIRD1_5063 (dadX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Amidohydro_2
Motif
Other DBs
NCBI-ProteinID:
ADR62610
LinkDB
All DBs
Position
complement(5669854..5670927)
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AA seq
357 aa
AA seq
DB search
MRPARALIDLQALRHNYRLARELTGAKALAVIKADAYGHGAVRCALALEAEADGFAVACI
EEALELRAAGIKAPVLLLEGFFEASELALIAEHGLWCVVHSLWQLEAIEKTPLHKPLTVW
LKLDSGMHRVGLHPKDYHDAYQRLLASGKVSRIVLMSHFARADELDADATAQQIAVFEAA
RQGLAAECSLRNSPGVLGWPQAPSDWVRPGLMLYGATPFEVAQAEAARLQPVMTLQSRVI
SVRELPAGEPVGYGAKFVSPRPTRVGVVAMGYADGYPRQAPNGTPVLVAGKRTQLIGRVS
MDMLSIDLTDVPQATVGSPVEFWGKQVLASEVAAHAGTIPYQIFCNLKRVPRDYIGE
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcccgcccgcgccctgatcgacctccaggccctgcgccacaactaccgtctggcc
cgtgaactgacgggtgccaaagccctcgccgtgatcaaggccgatgcctacggccacggc
gccgtgcgctgcgccctggccctggaggccgaagccgacggctttgccgtggcctgcatc
gaagaggcgctggaactgcgcgccgccggtatcaaagccccggtactgctgctggaaggt
tttttcgaagccagcgaactggcgctgatcgccgagcacggcctgtggtgcgtggtgcac
tcgctgtggcagttggaagccatcgaaaaaaccccgctgcacaagccgctcaccgtctgg
ctgaagctggacagtggcatgcaccgcgttggtttgcaccccaaggactaccacgatgcc
taccagcgactgctggccagtggcaaggtttcgcgcatcgtgttgatgagccacttcgct
cgcgccgacgaactggacgctgacgctaccgcccagcaaatcgccgtgttcgaagctgcc
cgacagggcctggccgccgagtgcagcctgcgtaactcgcccggcgtgctcggctggccg
caagcgcccagcgactgggtgcgcccaggcctgatgctgtacggcgccacgccgttcgaa
gtggcccaggccgaggccgcacgcctgcaaccggtgatgaccctgcaatcgcgggtgatc
agcgtgcgcgagctgcctgccggcgagccggttggctatggtgccaagttcgtcagccct
cggccgacccgcgtgggtgtggtcgccatgggctatgccgatggctacccgcgccaggcg
cccaacggcaccccggtgctggtcgctggcaagcgcacccagctgatcggccgggtgtcg
atggacatgctcagcatcgacctcaccgacgtaccgcaagccactgtcggcagcccggtc
gaattctggggcaagcaggtgctggccagtgaagtggccgcgcatgcgggcactattccc
taccagatcttctgtaacctgaagcgggtaccacgggactacatcggcgaatga
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