Pelobacter propionicus: Ppro_0186
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Entry
Ppro_0186 CDS
T00436
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ppd
Pelobacter propionicus
Pathway
ppd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Ppro_0186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppd03400
]
Ppro_0186
Enzymes [BR:
ppd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Ppro_0186
DNA repair and recombination proteins [BR:
ppd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Ppro_0186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
PIF1
Helicase_RecD
UvrD-helicase
PhoH
AAA_22
AAA_28
T2SSE
SLFN-g3_helicase
nSTAND3
NTPase_1
AAA_16
AAA
HHH
AAA_29
HHH_2
AAA_5
RsgA_GTPase
Mg_chelatase
ABC_tran
DEAD
Pox_A32
bpMoxR
NACHT
cobW
TsaE
AAA_7
AAA_14
AAA_24
Herpes_Helicase
GvpD_P-loop
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
ABK97822
UniProt:
A1AKF2
LinkDB
All DBs
Position
186351..188537
Genome browser
AA seq
728 aa
AA seq
DB search
MNGKPNTTDIPVERLSGSVERVTFHSEESGFCVLRVKVKGKRDLVTVIGSAAAITAGEFV
ECVGSWHNDKTHGLQFKTINLKTVPPSTLEGIEKYLGSGMVKGIGPHFAKILVKAFGIEV
FTVIEETPERLLALPGIGRKRTDKVTAAWAEQKAIREIMVFLQSHGVGTGRAVRIYKTYG
DEAIVKVSENPYRLALDIHGIGFKTADVIAGKLGIAPDSLIRAQAGVRHVLQELSSDGHC
AAPHDKLITESVKLLEINEAILEEAVREEITQENLVPEEIDGISCLFLTPLHRAELGVAN
SIRRILDGAPPWGTIDAEKALPWVEEKTGLTLSQSQKDAVRLALASKALVITGGPGTGKT
TLVNSILKILAVKQLHILLAAPTGRAAKRLTETTGQEAKTIHRLLEFDPQSFGFKRGRDN
PLEADLIVIDESSMVDVVLMNKLLAAIPDNAALMIVGDVDQLPSVGPGAVLSDIIESRAV
PTVRLTEIFRQAATSRIIVNAHRINKGELPLKNEKDELSDFYFVPADTPEEIHAKLMQVV
TERIPKRFGLHPVKDVQVLTPMNRGGLGTHSLNAELQKMLNANSEPRVTRFGTTFSPGDK
IIQTVNNYDKEVFNGDIGQILEIDTEESSLKADYDGRIVEYEFGELDEVSLAYATSIHKS
QGSEYPAVVIPLAMQHYMLLERNLVYTAVTRGKKLVTIIGQPKALGMAVRNTNSNRRLTN
LTARLQHT
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggaagccgaacacaaccgacatcccggtggagcgtctctcaggttccgtcgaa
cgggtaaccttccacagcgaggagtcgggtttctgtgtccttcgagtcaaggtcaagggg
aagcgcgacttggtcacagtcatcggcagcgccgccgccatcactgccggcgaattcgtc
gagtgcgtggggagctggcacaatgacaaaacccacggtctacagttcaagaccatcaat
ctgaagacggttccgccgagcaccctggaagggattgagaagtacctcggctcaggaatg
gtcaaggggatcggcccccatttcgccaagattctggtgaaggccttcggcatcgaagtc
tttaccgtcattgaggagacaccggagcggctgctggcactccccggcatcggcaggaag
cggaccgacaaagtcaccgccgcctgggccgagcagaaggcaatccgggagatcatggta
ttcctccaatcgcacggcgtcggcaccggacgggcagtgaggatctacaagacctacggt
gacgaggcgatcgtcaaggtctccgaaaacccctaccgattggcactcgacatccacggc
atcggcttcaagaccgccgacgtcattgccggcaaacttggcatcgcccccgactcgctg
atccgggcccaggccggggtgcgccatgtgctgcaggaattgtccagcgacggtcactgc
gccgccccccacgacaagctcatcacggagtcggtcaagcttctggagattaacgaagcg
atcctggaagaagccgtccgggaggaaatcacccaggaaaatctggtaccggaagagatc
gatggtatctcctgtctgttcctgactccactccacagggccgaactgggagtggcgaac
agcatcagacggattctggatggtgcaccgccgtggggtacaatcgatgcggagaaggcg
ctcccttgggtggaggaaaaaacgggcctgacgctttcccagtcgcagaaggacgctgta
cgacttgctctggccagcaaggcgctcgtcatcaccggcggaccgggcaccggcaagacg
acccttgtcaacagcatcctcaaaatcctcgcggtcaaacagctccatatcctgctggcc
gccccgaccggacgtgcagccaagcgattgaccgagaccaccggacaggaggccaagacc
atccatcgcctcctggagttcgatccgcagagcttcggcttcaaacgcgggcgagacaac
cctcttgaagccgacctcatcgtcatcgacgagtcatccatggtagatgtggtcctgatg
aacaagctgctggcggcaatccccgacaatgcagctctgatgatcgtcggcgacgtggac
cagctgccatcggtcggccccggtgctgtgctgtctgacatcattgaatccagagcggtt
cccaccgtccggttgaccgaaatcttccgccaggcagccacctcccggatcatcgtcaac
gctcaccggatcaacaaaggggagttgccgttgaaaaatgagaaggacgagctttccgac
ttctacttcgtcccggcggataccccggaggagattcacgccaaactgatgcaggtggtt
accgagcgaatcccgaaacgcttcggcctccatccggtcaaggacgtccaagtgctcacc
cccatgaaccggggaggactgggcacccattccctgaacgccgaactgcagaagatgttg
aacgccaacagcgaaccacgggtgacccgtttcggcactaccttctcgccgggcgacaag
atcatccagacggtgaacaactacgacaaggaagtcttcaatggggatatcgggcagatt
cttgaaatcgacaccgaagagagctccctcaaagccgattatgacggcaggattgtggag
tacgaatttggggaacttgacgaggtgtcgcttgcctacgccaccagcatccacaagagc
cagggttcggagtacccggcagtggtaatcccgttggcgatgcagcactatatgctgctg
gagcggaatctggtctacaccgctgtcacccgggggaagaaactggtgacgatcatcggc
cagccgaaggctttaggcatggcggtgagaaataccaactccaaccggagactgaccaac
ttgacggcgaggcttcaacacacatga
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