Polaribacter pectinis: H9W90_04600
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Entry
H9W90_04600 CDS
T08187
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ppec
Polaribacter pectinis
Brite
KEGG Orthology (KO) [BR:
ppec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppec03021
]
H9W90_04600
Transcription machinery [BR:
ppec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H9W90_04600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
DUF3135
Motif
Other DBs
NCBI-ProteinID:
QNM86409
UniProt:
A0A7G9LCR0
LinkDB
All DBs
Position
complement(971247..971756)
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AA seq
169 aa
AA seq
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MNQSDFLKVVLPFKDKVFRLAKRLLVSREEAEDATQELLFKLWKSKEKIADYKNVEAFAM
TMTKNYCYDRLKSKQASNLTLVHSNYKEKETALDKKIEHQDSVNQVHQLIENLPEQQKII
IQLRDIEQYDFDEICKMVDMKPTAVRVALSRARKTIREELIKKHNYGVS
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaatcagactttttaaaagtggttttaccgtttaaagataaggtctttcgtcta
gcaaaaagattgttagtttctagagaagaagctgaagatgctacacaagaactccttttt
aaactgtggaaaagcaaagaaaaaattgctgattataaaaatgttgaagcttttgctatg
accatgacaaagaattattgttatgacagactaaaatctaaacaagcaagtaacttaaca
ttagtacatagcaattacaaagagaaagaaacagctctggataagaaaatagaacatcaa
gacagtgtaaaccaagtacaccaattgatagaaaacttaccagaacaacaaaaaattatt
attcaattaagagacattgaacaatatgattttgatgagatctgcaaaatggtagatatg
aaaccaactgcagttagagtagccttgtctagagcaagaaaaacaattagagaagaatta
attaaaaaacacaactatggagttagctaa
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