Pseudomonas pergaminensis: KUA23_04910
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Entry
KUA23_04910 CDS
T08563
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ppeg
Pseudomonas pergaminensis
Pathway
ppeg00300
Lysine biosynthesis
ppeg00550
Peptidoglycan biosynthesis
ppeg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KUA23_04910
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KUA23_04910
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppeg01011
]
KUA23_04910
Enzymes [BR:
ppeg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
KUA23_04910
Peptidoglycan biosynthesis and degradation proteins [BR:
ppeg01011
]
Precursor biosynthesis
Amino acid ligase
KUA23_04910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
USW02072
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Position
1082439..1083902
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AA seq
487 aa
AA seq
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MSLSLNKIFAHAGRDLLIRELSLDSRNVRAGDLFLAVPGGKFDGRAHIADALQRGAAAVA
YEVDGATVLPITDVPLIPVKGLAAQLSDIAGRFYGDPSRQLNLVGVTGTNGKTSVTQLIA
QALDLLGQHCGIVGTLGTGFYGALQSGLHTTPNPIAVQATLADLKKAGAKAVAMEVSSHG
LHQGRVAALAFDVAVMTNLSRDHLDYHGTMEAYAAEKAKLFAWNDLKCRVVNLDDEFGRQ
LAAEDRESRLISYSLEDASAYLYCREAQFNDEGVRATLVTPQGEHHLRSSLLGRFNLSNV
LAAVGALLGLDYALDEILRVLPKLEGPAGRMQRLGGGTQPLVVVDYAHTPDALEKVLLAL
RPHAKGKLLCLFGCGGDRDRGKRPLMAEIVERLADGVLVTDDNPRSEDPSQIFDDIRVGF
NDASKATFVAGRGAAIAQLIASASADDVVVLAGKGHEDYQEINGERHAFSDLVEADHALT
AWEVAHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttagcctgaacaagatttttgcccatgccggtcgcgatctgttgatccgcgag
ttgagcctggacagccgtaatgtacgtgccggtgacctgttcctcgccgtgcctggcggg
aagttcgatggccgtgcgcacatcgcggatgcgttgcagcgcggtgcagctgccgtggct
tatgaagtggatggcgctacggtgctgccgatcactgacgtgccgttgattccggtcaaa
ggcctggctgcgcagttgtccgatatcgccgggcgcttttatggcgacccgagccgccag
ctcaacctggtcggtgtcactggcaccaacggcaagaccagcgtgacccaattgattgcc
caggcgcttgatctgctgggccagcactgcggcatcgtcggcacactgggcacgggtttc
tacggcgcgctgcaaagcggcctgcacaccaccccgaacccgatagccgtgcaagcgacc
ctggccgacctgaaaaaggccggtgccaaggcggtcgcgatggaagtgtcgtcccacggc
ctgcaccaagggcgcgttgccgccctggcgttcgacgtggcagtgatgaccaacctgtct
cgcgatcatctggactaccacggcaccatggaagcctacgctgccgaaaaggccaagctg
tttgcctggaacgacctcaagtgccgcgtggtaaacctggacgacgaattcggccgccag
ctggctgccgaagaccgtgagtcgcgcctgatcagctacagcctggaagacgccagcgct
tacctgtattgccgtgaagctcaattcaatgacgaaggcgtgcgcgccacgctggtgacg
ccgcagggcgagcaccatttgcgcagcagcctgctcggtcgtttcaacctgagcaacgtg
ctcgccgccgttggtgcgttgctcggcctggattacgccctggatgagatcctgcgcgtg
ctgccgaagctggaaggcccggctggccgcatgcagcgcctgggtggcggcacgcagccg
ctggtcgtggtcgattacgcccacacaccggacgccctggaaaaagtcctgttggccctg
cgtccccacgccaagggcaaattgctgtgcctgttcggctgtggcggtgatcgcgatcgc
ggcaagcgccctttgatggctgagattgtcgagcgcctggccgatggcgtgcttgtcacc
gacgacaacccgcgtagcgaagacccgagccagattttcgacgacatccgtgttggcttc
aacgacgcgtccaaggccactttcgttgccggtcgtggcgcggccattgcccaactgatc
gccagcgccagcgctgacgatgtggtggtgctggctggtaagggccacgaggactatcag
gaaatcaatggcgagcgtcatgccttctccgatctggtcgaggccgatcacgccctgacc
gcctgggaggtcgcccatgcttaa
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