Pyricularia pennisetigena: PpBr36_08010
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Entry
PpBr36_08010 CDS
T08194
Name
(RefSeq) hypothetical protein
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
ppei
Pyricularia pennisetigena
Pathway
ppei03008
Ribosome biogenesis in eukaryotes
ppei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppei00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PpBr36_08010
09123 Folding, sorting and degradation
03018 RNA degradation
PpBr36_08010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppei03021
]
PpBr36_08010
03019 Messenger RNA biogenesis [BR:
ppei03019
]
PpBr36_08010
03009 Ribosome biogenesis [BR:
ppei03009
]
PpBr36_08010
03016 Transfer RNA biogenesis [BR:
ppei03016
]
PpBr36_08010
Transcription machinery [BR:
ppei03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
PpBr36_08010
Messenger RNA biogenesis [BR:
ppei03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
PpBr36_08010
Ribosome biogenesis [BR:
ppei03009
]
Eukaryotic type
Pre-60S particles
RNases
PpBr36_08010
Transfer RNA biogenesis [BR:
ppei03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
PpBr36_08010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
40737448
NCBI-ProteinID:
XP_029747338
LinkDB
All DBs
Position
5:complement(169050..172393)
Genome browser
AA seq
1025 aa
AA seq
DB search
MGIPAAFRWLSTKYPKIISPVIEDKPVEMEDGTSIPVDITKPNPNGEEFDNLYLDMNGIV
HPCAHPEDRPAPQDEEEMMLEIFKYTDRVFNMVRPRKVLMIAVDGVAPRAKMNQQRSRRF
RSAQEAKEKAEDKLELLKLLKQQKGGDVSAETLESVTKKAFDTNSITPGTPFMDILAGSL
RYWCAYKLNTDPGWANVKIIISDATVPGEGEHKIMDFVRSQRSSPDHDPNTRHVIYGLDA
DLIMLGLATHEPHFRVLREDVFFQQGKPRLCKLCGQKGHDAQQCKGEVKKKEGEFDEKQN
AEPLKPFIWLHVSILREYLNVELYVPDLPFRFDLERAVDDWIFLCCFVGNDFLPHLPALE
IRENGIITLTSIWKQNLPRMGGYVTKDGHIDLERVQYIMDGLAKQEDSIFRKRKEQEDRR
DANAKRRKMQDDRAKWGNNSANGPHVSEPPKAITHDMVVNRAAAQMDANVANKSAASMLK
SQLKAMQSQAPETSAPETPVKEGVASEETTPASALGKRKAALMEDGDSPAPNSPTPGTPA
SGNGEAVDTVRLWEDGYADRYYEQKFHVDPKNVEFRHKVAHAYVEGLAWVLLYYFQGCPS
WEWFYPYHYAPFAQDFVGLKDLDITFEKGRKSKPYEQLMSVLPAASRDNLPPIFHDLMTK
EDSEIIDFYPEDFEVDLNGKKFAWQGVALLPFIEMDRLLAAVQAKYPQLTADEAARNGLG
RDVLIISDAHAPLYDDLITNFYSKRQTGSTYKLDQKNSDLLAGVVEKLPDYLPHGSLVYP
LERKCMPDVEYDRSLTVYYDMPQAVAHKSMLLRGLKMPTPALTRHDIDDLKNKMRGGGGR
GGYGGGRGGGGGGGGGGYGGGGRGGYNGNNGNNSNGGHRNGVDSYSPRDQRGGRPPQHQS
WQPPPPGSAGFGMGVPPPPPPAHHYGGHGGGYNDRYAQGYPPSYPQYPPPGQGYPPAYPP
SYGPPPGQYGGGGHYPPPPPPGHNQSYRPDDRGYRGGYNGGRDRGPPRGGGGGGGGGRGR
GGYGR
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcccagcggctttccggtggttatccaccaaataccccaagatcatttcgccg
gtgatcgaggataagcctgttgaaatggaagatggcacctctatccccgtcgacattaca
aagccgaacccaaatggcgaagagttcgataacctttacctggacatgaacggcatcgtc
catccctgcgcccatccagaggacaggccagcaccccaagatgaggaggagatgatgctg
gaaatcttcaagtataccgaccgcgtcttcaacatggtcaggcctcgcaaggttctgatg
attgctgttgatggtgtcgcccctcgtgccaaaatgaaccagcagcgatcgcgccgcttc
cgatccgcccaggaagccaaggaaaaggccgaagacaagcttgagctcctcaagctgctc
aagcaacagaagggcggcgacgtcagtgccgagaccctcgaaagcgtcacaaagaaggcc
tttgacaccaactccatcactcccggcaccccgttcatggacatcttggccggcagcctg
aggtattggtgcgcgtacaagctcaacacagatccgggctgggccaacgtcaaaatcatc
atctcggacgcaacagtgcccggagaaggagaacacaagatcatggactttgtgcgctcg
cagcgatcatcgcccgatcacgaccccaacacgcgacacgtcatctacggcctggatgcc
gatttgatcatgctgggactggccactcacgagcctcacttccgtgtcttgcgtgaggat
gttttcttccagcaaggcaaaccgaggctgtgcaagctttgtggccagaagggccacgat
gcacaacaatgcaagggagaggttaagaagaaggaaggcgagtttgatgagaagcagaat
gccgagccactgaaacctttcatctggctacacgtgtctattctgcgcgagtacctgaac
gttgagctctacgtcccggacttgccgttccgctttgatttggagagagccgtggacgat
tggatctttctttgctgtttcgtcggcaacgatttcttaccccatttgcccgcacttgaa
atccgagagaatggtatcatcaccttgacctcgatctggaaacagaacctgccccggatg
ggtgggtacgtcacaaaggacggccacattgacctggaacgtgttcagtacattatggat
ggcctagcaaagcaagaggactccatcttccggaagcgtaaggaacaggaggatcgcagg
gacgccaacgcgaagaggcgcaagatgcaggacgacagagccaagtggggaaataacagc
gccaacgggccgcacgtctcggagcctcccaaggcaatcactcatgacatggtggttaac
cgcgccgctgctcagatggatgctaacgtcgccaacaagagcgcagcgagcatgcttaaa
agccagttgaaggcgatgcaatcccaagcccccgaaacaagcgctcctgagactccagtc
aaggaaggggtcgcttctgaagaaaccacccctgcttcagctcttggcaagcgcaaggct
gccctcatggaggatggcgatagccctgctcccaacagccctacccctggaacgccggcc
agtggaaacggcgaagcggtcgacactgtgaggctctgggaggacgggtacgcagatcgt
tactacgaacaaaagttccatgtcgaccccaagaacgttgaattccgccacaaggtggcg
cacgcgtacgtcgaaggccttgcctgggttcttctctactattttcagggatgcccgtct
tgggagtggttctacccgtaccattatgctccatttgctcaagatttcgtcggtctcaag
gaccttgacataacgtttgaaaagggcagaaagtccaagccttacgaacagttgatgagc
gtcctgccggccgcatcacgcgataacttaccccccatcttccacgatctcatgaccaaa
gaggacagcgagattattgacttctaccctgaagactttgaggtagatctgaacggcaag
aaattcgcctggcagggtgttgcgcttctgccttttattgaaatggaccggctgcttgct
gcagtccaggccaagtatccacagctgaccgctgatgaggcagccaggaacggtcttggc
agagacgtacttatcatttcggatgctcatgcgcctctgtacgatgatcttattacgaac
ttctactcgaagcgtcagacaggttcgacctataagctcgaccagaaaaatagtgacttg
ctggctggagttgtggaaaaactgccagattatcttcctcatggttctctcgtgtatcct
ctggagaggaaatgcatgccggacgtcgaatatgaccggtcactaacagtttattacgac
atgccccaggctgttgcacacaagtcaatgcttcttcgtggtctgaagatgcctacacct
gcactaacccgtcacgacattgatgacctgaagaacaagatgcgcggcggtggaggccgc
ggtgggtatggcggcggtcgcggtggtggtggtggtggtggtggtggtggttacggtgga
ggtggcagaggtggttacaatgggaataatgggaacaacagtaacggcggccaccggaat
ggggtcgactcgtacagcccgcgcgaccagcgtggtggcagacccccgcagcatcagtct
tggcagcctcctcccccaggatcggccggctttgggatgggcgtgccgcctcctcctccc
ccagctcaccactatggcggccatggtggaggctacaacgataggtatgcgcagggttac
cccccaagctacccacagtacccaccaccaggccaaggatatcctccagcctatcctccg
tcatatggaccaccaccgggtcagtacggtggtggtggtcattacccgccgcctcctcct
cccggtcacaaccagtcataccgtcccgatgatcgtgggtacaggggtggttacaatggt
ggtagggatagagggcctccacgaggtggtggtggtggtggcggtggtggtagaggaaga
ggaggttatgggaggtga
DBGET
integrated database retrieval system
