Pediococcus pentosaceus SL4: T256_09035
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Entry
T256_09035 CDS
T02906
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ppen
Pediococcus pentosaceus SL4
Brite
KEGG Orthology (KO) [BR:
ppen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppen03400
]
T256_09035
Enzymes [BR:
ppen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
T256_09035
DNA repair and recombination proteins [BR:
ppen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
T256_09035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
FliG_N
DrrA_P4M
Motif
Other DBs
NCBI-ProteinID:
AHA05857
LinkDB
All DBs
Position
complement(1770447..1774025)
Genome browser
AA seq
1192 aa
AA seq
DB search
MPLQFMYGPASIDHLEGIADRVIELQQQNVGRPVYYLVPNHIKFQSEIQLLQKLRQRRDV
KSHIFAEKDVQILSISRLAWFFLRNSSIYQYPRVTSSSSNMLLYRVILEHQDELILFHNI
DAQLGLVQKIATQLAEFKQGNVGPDELGRVAENIAENSDAGMDIKAKLHDLGIIYSAYEE
EIQSRFIDASDITHTLTDELSKMDLSGQSFIISGFSNFTAEEMSLIQALMKANGNVVIDL
IMDKFPLYEKVSENSLFFENEKIIFKFNAWAHENKVKSLEPVRLHRVRVNSDLLKLEKYW
IESSEGQVGGSKQENNACVTIFQANSRYAEVEHVATLIRQKMAKDPSLKFSDFSVLTRHL
SDYSTIIKPIFDQMEFPIFYDLQIAMKDHPLLELINALFDIKAHHFRYEDVMRLLKTGLL
FPETEDDPHGMDFFKSVHITENYVLKQGIYGDRWLQKKDWKYSRFNDIDEEKQTDEEIEI
NQRINTVKNYVAETVVPFFNQLSTATTGVEAAKALYDFLIKNGIDQCLLAWRDQWIEEGR
LAKAAEPEQTWETFIQMLDEFVDILGDQPFDPDNFMGLLNAGFEGATYSQIPSTLDQILV
SESGMVQMVDRKIVFIIGATDRVMPEQIQDNDFLNQDGKNQIDPFLDDDQFLRISNDRQM
RQEPYLNYLTFMIGSDELIFSYPKSGNDGVELKISPYVERIGKHFGIIAQSLPSRPTTEP
VRLDPPFIELFIGSNRSTLSHLIQYARAMHEVKSEADPRWNLIYTILRQSTLGSLTDQLL
SSLEYKNIPEKLKPEIVEGLYGDTIYASVSKLEEFYRNEYSYFLKYGLKLQERETSDLSP
ADTGQYFHAAMDKLIKMITTENLNFNEVNQEQIEQIAKRLVQQMEQDQQFDQFNGTYRMG
FLRKQLDRTVQAMVEAIFKQLARTRMRPIASEQLFGQIGSQSGLPALNFKVGEGKEINVR
GKIDRIDKIEIGDKDYLGIVDYKSSNRKFDFTDAYYGLAMQMLMYLDVVQRNKEKIDPAT
KAEISSALYMIFQYPLLKSKEWKGSDANQLNQSIFKKFSLNGFLLKDEELIKEIDKTIED
TRKSDVFPIAFTTKGALTKVSENSILSEDELQNLIKHAELKVREAGEKIFKGELDMNPVQ
WPNRRTVMEYSPYKDVMQFDAMLPENNYRIIDKLDKDQVLEQIREEQEKNGR
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgccacttcaatttatgtatggaccagcaagtattgaccatctagaaggtattgccgac
agggtaattgaacttcagcaacagaatgtcggtcggccagtatattatttggttcctaat
cacatcaagtttcaatccgaaatacaattgcttcaaaagttgcgacagagaagagatgtt
aagagtcatatttttgcagaaaaggatgttcaaattctttcaattagccgattagcctgg
tttttcttacgaaatagcagtatttaccaatatcctcgcgtaacgagctcgagttctaat
atgctgttatatagagtgattttagaacatcaagatgaattaatcttgtttcataatata
gatgctcagttggggctggtacagaagattgcaacgcagttagctgaattcaagcaaggg
aatgtagggcccgacgaattaggtcgagttgcggaaaatattgccgaaaacagcgatgca
gggatggatattaaggctaaattacatgatctaggcataatttatagtgcttatgaagaa
gaaattcaaagccgtttcattgatgctagtgatattacgcatactttaacagatgaatta
tctaaaatggatttaagtggtcagagttttataattagtggcttttcaaattttactgct
gaagaaatgagtctaattcaagccttaatgaaggccaatggaaatgtcgttattgattta
ataatggataaatttcctctttatgaaaaagtttcagaaaacagtttgttttttgaaaac
gaaaaaataattttcaaatttaatgcgtgggctcatgaaaacaaggtgaaatcgctagaa
ccagttcgtttacaccgagttagagttaattctgatcttttaaaattagaaaaatattgg
atcgaatcaagtgaaggtcaagtaggaggttctaaacaagaaaataacgcatgtgttacg
attttccaagcaaatagtcgttatgcagaagtagaacatgtggcgactttaatacgccaa
aaaatggctaaagatccaagtttaaaattttcagatttttcagttttaacccgacatttg
agtgactattcaacgattattaagccaatatttgatcaaatggagtttccgatcttttat
gatcttcaaattgcaatgaaagatcatccattactagaattgattaacgctttgtttgat
attaaagcacatcattttcgttatgaagatgtaatgcgtctattaaaaacgggtctgtta
tttccagaaactgaggatgacccgcacgggatggacttcttcaagagtgtgcatattact
gaaaattacgttttaaaacaaggaatctatggagaccgatggcttcagaaaaaagattgg
aaatatagtcgttttaacgatattgacgaagagaagcaaacggatgaagaaatcgaaatt
aatcagcgaattaatacggtaaaaaattatgtggcggaaacagttgtgccattttttaat
caactttctactgcaaccactggtgtggaagcagccaaggccttgtatgactttttaatt
aaaaatggaattgatcaatgcctacttgcttggcgagaccaatggattgaggaagggcgt
ttggcgaaagctgctgagcccgaacaaacttgggaaacttttatccagatgctcgatgaa
tttgtcgatattctaggagatcagccatttgacccagataattttatgggtcttttaaat
gcgggatttgaaggggcaacctattcgcaaatcccatctacactagatcaaattctagtt
tcagaaagtggaatggtccagatggttgaccgtaaaattgtatttatcatcggagctact
gatcgagtaatgccggaacaaattcaagataatgattttttgaatcaagatggtaaaaat
caaatagatccgttcttagatgatgatcaatttttgagaattagtaatgatcgacagatg
cgccaagaaccataccttaattatctaacgtttatgattggttcagatgagttaattttc
tcttatccaaaaagtggaaatgatggcgtagaattaaaaatctcgccttacgtagaacgg
attggtaaacattttggaattatcgcccaatcattaccaagtcgaccaacaactgagccg
gttcgactggatccaccatttatcgagctatttattggttccaatcgaagtacattgagt
catttaattcagtatgcgagagccatgcatgaagttaaaagtgaagcagacccacgctgg
aatctaatttatacaattttgagacagagtacattgggttctttaacagatcagttacta
agcagtctggaatataaaaatattcccgaaaaattgaaaccagaaattgtggaaggtctt
tacggcgatacaatttatgcttcagtatcgaagctagaagagttttatcgaaatgaatat
tcatacttcttaaaatatggattgaagttacaagaacgggaaacatcggatttgagcccc
gctgatacagggcaatatttccatgcagcaatggataaactgattaaaatgattactact
gaaaatctgaacttcaatgaagttaatcaagaacagattgaacaaattgcgaaaagatta
gttcaacaaatggagcaagatcaacaatttgaccagtttaatggaacttatcggatggga
tttttgcgaaaacagctagatcgaacggtgcaagcgatggtcgaagcaatctttaaacaa
ctggctcgcacacgaatgcgtccgattgcatcggaacaattatttggtcagattggttcg
caatctggattgccagcgttgaactttaaggttggagaaggcaaggaaattaacgtacgc
ggtaaaattgaccgtattgataagatcgaaattggcgataaggactatttaggaattgtc
gattacaaatctagtaaccgtaaatttgatttcacagatgcttactatgggttagcgatg
caaatgttaatgtacttggatgtagttcagcgtaataaagaaaagattgacccagctaca
aaagcagaaatttcgagcgcattatatatgattttccagtacccgcttctaaaatcaaaa
gagtggaagggcagcgatgctaaccaacttaaccaaagcatattcaaaaaattctcacta
aatggatttttattaaaagatgaggaattaataaaggaaattgataagacgattgaagac
accagaaagtccgatgtatttccaattgcatttactactaagggagctctaacgaaggtt
agtgaaaatagtatcttaagcgaagatgaacttcaaaatttgattaaacatgcagaattg
aaggtacgtgaagctggagaaaagattttcaagggtgagctagatatgaatccggtacag
tggcctaatcgaagaacagtgatggaatattctccttataaagatgtcatgcaatttgat
gcgatgttacctgagaataattatcgaataattgataagctagataaagatcaagtacta
gaacagattcgggaggaacaggaaaagaatggcagatag
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