Prunus persica (peach): 18783996
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Entry
18783996 CDS
T03092
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pper
Prunus persica (peach)
Pathway
pper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18783996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pper03041
]
18783996
03009 Ribosome biogenesis [BR:
pper03009
]
18783996
Enzymes [BR:
pper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
18783996
Spliceosome [BR:
pper03041
]
Complex A
U1 snRNP components
U1 related factors
18783996
Complex B
18783996
Ribosome biogenesis [BR:
pper03009
]
Eukaryotic type
Pre-60S particles
Helicases
18783996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
18783996
NCBI-ProteinID:
XP_007217002
UniProt:
M5WYA7
LinkDB
All DBs
Position
G3:25935082..25940330
Genome browser
AA seq
688 aa
AA seq
DB search
MAATATASSGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYDRPTGSAPPLKPS
SAQSISSSVHVQQSSQGRRPDEGDDRYGRGSNGGSKFDAGPRNQQSARSATVSSHNIPNG
TLSALGGSSLRGNGSSDTGIGLSAEAYSRRHEISVIGDNVPPPFTSFEATGFPSEILREV
QNAGFSSPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLLPGFIHLKRSRNDPQLGPTV
LVLSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIDRGADVVVATPGRLND
ILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKEVRKIA
ADLLVNPVQVNIGNVDELVANKSITQYIEVLAPMEKHRRLEQILRSQEPGSKIIIFCSTK
KMCDQLSRNLTRQFGAAAIHGDKSQSERDYVLNQFRSGRTPILVATDVAARGLDIKDIRV
VINYDFPTGVEDYVHRIGRTGRAGATGLAYTFFGDQDSKYASDLIKVLEGANQRVPPEIR
EMATRGGGMNRFRRWGSGSGGRDGGRGGRNDSSYGGRDGGRGGGWGFTPSSGRYDRGHNN
GYDRGRSPDKGSGHRGSNRSRSRSLERFDKALPTGGGSAGWSFHKAMMERERSSPPPPRS
LPYGGGVDEAEEGMIPQEEEGGYHIANA
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggctgccactgcaactgcctctagtggtcctcgatatgctccggaggaccccactctt
cccaaaccatggagaggattggttgatggtaaaactgggtatctttacttttggaacccc
gagactaatgttacccaatatgacaggcctacgggctcagctcctccgttaaagccgtct
tcggcacaatctataagttcttcagttcatgttcaacaatcttcacaaggacgtcgtccg
gatgagggagatgataggtatggcagaggcagcaatggtgggtcaaaatttgacgctgga
ccaagaaatcagcagagtgcaagaagtgcaacagtttcttctcataatatcccgaatggg
acacttagtgcacttggaggatcttctctgagaggaaatggatcatcagacactggaatt
ggtttgtctgctgaggcttatagtcgtcgacacgaaatatctgttattggtgataatgtg
cctccacccttcacttcatttgaagctactggcttcccatccgagattcttagagaggta
caaaatgcaggtttttcttccccaactccaattcaggcacagtcttggccggttgctctt
caaagtagagatatagtagccattgctaaaacaggttcagggaagaccttggggtattta
cttcctggattcatccatctcaagcgcagccgtaatgaccctcagttgggtcccactgtg
ttggtgctatcaccaacaagggagctggcaacacagattcaagatgaggcagtgaagttt
gggaagtcctcaaggatatcttgtgtgtgtttgtatggaggagctccaaagggtccacag
ttgagagatattgaccgaggagccgatgttgtggttgccactcctggccgcttgaatgat
attcttgaaatgaagagaatcagcctccatcaagtttcgtacttagtgttggatgaggct
gaccgtatgctggacatgggatttgaacctcaaataaggaagattgtgaatgaggtacct
gctcgccgccagaccctaatgtatacagcaacttggccaaaggaggttcgcaagattgca
gcagatctgctggtcaatcctgttcaggttaacattggcaatgttgatgaactggttgcg
aataaatcgatcacacagtatattgaagtactcgccccaatggagaaacacaggcgactg
gagcaaatattgcgatctcaagagccaggatccaaaataataatcttttgttcaaccaag
aagatgtgcgatcaactttctcgcaacctaacccgccagtttggagctgccgcaattcat
ggtgacaaatctcagagtgagagggactacgtgttgaatcaatttcgctctgggaggact
ccaattcttgtagcaactgatgttgcagctcgaggattggacatcaaggacataagggtg
gttatcaactacgacttccccactggagtggaggattatgttcacagaattgggagaact
ggaagagctggtgccactgggctggcttacacattcttcggtgatcaggattcaaagtac
gcatcagatctcatcaaagttttggaaggggcaaatcagcgtgtccccccagaaattcgt
gagatggctacccgtggtggtgggatgaacaggttcagacgttggggttctgggtctggt
ggccgtgatgggggtcgtggtggacgaaatgattcaagttatggtggaagggatggtggg
aggggaggcggatggggatttactccctcttctggcaggtatgaccgtggtcacaacaat
gggtatgatagaggccgaagccctgacaaggggtcaggacatagaggctctaaccgcagc
cgtagtcgtagtcttgagaggttcgacaaggctctgcctacaggtggaggctctgcaggg
tggagttttcacaaagcaatgatggaacgtgaacggtcatcgccgccacctccacggtca
ctcccgtatggtggtggggtggatgaagctgaggaaggtatgatacctcaagaagaggag
ggtgggtatcatattgcaaatgcataa
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