Prunus persica (peach): 18786963
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Entry
18786963 CDS
T03092
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH isoform X1
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
pper
Prunus persica (peach)
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pper04121
]
18786963
Enzymes [BR:
pper01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18786963
Ubiquitin system [BR:
pper04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
18786963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Helicase_C
zf-RING_UBOX
PHD_5
zf-C3HC4
PHD
zf-RING_2
Vps39_2
ASH2L-like_WH
TPR_12
TPR_2
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
18786963
NCBI-ProteinID:
XP_020413748
LinkDB
All DBs
Position
G2:complement(27229808..27241560)
Genome browser
AA seq
1678 aa
AA seq
DB search
MGRRKQSRPNRSGGVILKSHSNADQAEVAEDKLSTEESRKNELDKVEKPYFVEVVRSCWV
SDEHLDIAEVVLTDLNWGEEFSGDGFGEDFNQDSYSLRFRVCNMNEHISRIKCGGHWPVL
SSADISLEFIKKCPTENMERLSVILSGSFDGPDEGISGLVHLASLKFMTLRPARWVGFAD
DMSTIRVRVEILKSAFDACESLLDTNTRQLWKKSMLNVMAWLHPEVMTSEARYGVSKSTE
MEADLHTQTGEANSGPGKHGRFDVAGFYEAIKPSKADAMLQDDMPDLLPELKPYQRRAAY
WMVRREKGDAESMAEEEKSQFISPLCLPLEFLDTSSKIFYNPFSGSVSLHPQNSSPYVFG
GILADEMGMGKTVELLACIFAHRKSADEDNMFADSESQATEDLKVNLKRLKRERVECICG
AVSENRSYKGLWVQCDVCDAWQHADCVGYSEASNGKECGRSSVFNKYIRKKNTTTIVVRD
GKYICQLCSELINATNSPIATGATLIICPAPILPQWHAEIMRHTRSGSLKTCIYEGVRGT
SFSNTSVINISELISADIVLTTYDVLKEDLSHDSDRHEGDRRLMRFQKRYPVVPTILTRI
FWWRICLDEAQMVESNAGAATEMAMRLYAKHRWCITGTPIQRKLDDLYGLLRFLKACPFN
ASRWWVEVIRDPYERRDAGAMEFTHKFFKKIMWRSSKVHVADELQLPPQEECLSWLTLSP
TEEHFYQRQHETCVTYAREVIESLKDDILKRKVRGCSASNDSSDPFLTHAEAGKLLNTLL
KLRQACCHPQVGSSGLRSLQQYPMTMEEILMVLVGKTKMEGEEALRGLVVALNGLAGIAV
IEQNFTQALSLYKEALALAEEHSEDFRLDPLLNIHIYHNLAEILPLATNCCPSKEQFPGS
STEMASKIHGIEKCDQHVVKRRKLSGKDNFAIGACNLLESTSELSDNEQKYLSAFSDVSL
RTACDNIKQKYLSAFSSKLSTAQQEFKKSYTQVCNAISERKDLSAVWWLEALLHSEKNKG
FSSELTRKIEEALIGTLNNSKSSRIASRFQSISGLKYHIQTGLDQLEASRKLLLDRLLEI
DQTMEKPKEEDIQSVRYCRNCKAYDDGPLCVLCEVDELFQGYEARLFRSEKICGGMATSA
EEAVDLQKKNSALNRFYQNLSLPNKDLTSPSYKESKKRDVGKVVVSKSPSELEVVLGVIK
SHCKAQIGREGISEATKHLQILEGMRKEYGHARSLAIAQAQILQAYDEINMATSRLRLAE
NENDKSLDALSEHELPSANVLYTSDKFTSLQLLSCIKGKLRYLKGLVQAKQKTPLESPNH
SSVAEEAATMSTSTEQKNECILTGDKEACPVCQETLTIRKMVFPCGHVTCCKCLFAITEW
RLLNDKKVQDKWVKCPTCRQHTDVENIAYADDGQSESSRSSMLHATQSREKDEASITVKG
SYGTKIEAVTRRILWIKTTDPEAKVLVFSSWHDVLNVLEHAFTANGITHIRMKGGRKSQV
SISEFKGEKRSTKGNHKIHGQEPEQRPVQVLLLLIQHGANGLNLLEAKHVILVEPLLNPA
VEAQAISRVHRIGQKNRTIAHRFIVKGTVEESIYKLNQSKNTTAFINGNTKNQDEPFLTL
KDIESLFATAPPAVPEADEKPTEGSDEKETESLRHLPPSVAAAIAAEKRQKEQHACSS
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgggtagaaggaagcaaagccggccgaaccgatccggtggggtaatattaaagagtcac
agtaatgctgatcaggcagaagttgctgaagataagctttcaaccgaggaatcacgaaag
aatgagctggataaagttgagaaaccatattttgtggaagttgttcggtcttgttgggtt
tcggatgagcaccttgatattgctgaagttgttttaacagatttgaattggggagaagag
ttttctggtgatggatttggtgaggattttaatcaggatagttactccttaaggtttcga
gtgtgcaacatgaatgagcatatcagtcgtataaagtgtggtggtcattggcctgtgtta
tcctctgctgatatatctttggaattcattaaaaaatgtccaacggagaatatggaaagg
ttatctgtgattttatcagggagttttgatggaccggatgaaggtatctctgggcttgtt
cacttggcaagtttgaagtttatgacactgaggccagctcggtgggttgggtttgcggat
gatatgtcaaccatcagggttagggtggagatacttaagagtgcatttgatgcttgtgag
tcactgctggacactaatactaggcaactctggaaaaagagtatgttgaatgtcatggct
tggcttcatccagaagtaatgacttcagaggctaggtacggagtcagtaaatcaacagaa
atggaagctgatttgcatactcagactggagaggctaattcaggacctggtaaacatgga
aggtttgatgttgctgggttctatgaagccattaaaccatcaaaagcagatgcaatgctt
caagatgacatgccggatttgcttcctgaattgaagccatatcagcgccgtgcagcttac
tggatggtacggagagagaaaggagatgcagaaagtatggccgaagaagagaaaagtcag
ttcatatcacctttatgtttgcccttggaatttcttgatacaagttcaaaaattttctat
aacccattcagtggaagtgtttcgttgcatccacagaattcgtcaccttatgtctttggt
ggtattcttgcagatgagatgggcatggggaaaactgttgagcttcttgcttgcatattt
gctcatcggaagtcggcagatgaagacaacatgtttgctgattctgaatctcaagctacc
gaggatctgaaagtcaatcttaaaagattaaaaagggagcgagttgaatgtatatgtgga
gctgtgagtgaaaataggtcatacaaaggactatgggtacagtgtgacgtatgtgatgca
tggcaacatgcagactgtgtgggttattcagaggcctctaatggaaaagaatgtggaagg
agttcagtgtttaataagtacataagaaagaagaacacaactacaatagttgtgagagat
gggaaatatatttgccagctatgctcagagctgataaatgctactaactctccaattgct
actggtgccactcttataatttgtccggctcctatattgccccaatggcatgctgaaatt
atgcgtcatactcgttcaggttccttaaaaacttgtatctatgaaggtgtgagggggact
tctttttcaaacacatctgtaattaatattagcgaactcatcagtgctgacattgtatta
acaacatatgatgtgcttaaagaggacctgtcacatgactctgataggcatgaaggtgat
cgacgcctcatgagattccaaaagagataccctgttgttccaactattctgaccagaata
ttctggtggagaatttgtttggatgaggctcaaatggtggagagtaatgctggtgctgcc
acagaaatggctatgcggttgtacgctaagcaccgttggtgcattacagggactcctata
caacgcaagcttgatgacttatatggacttctacgatttcttaaagcatgccctttcaat
gcttctaggtggtgggttgaagttatacgagatccatatgagaggagagatgcaggggct
atggaatttacacataaattcttcaagaaaatcatgtggcgatcttcaaaagtgcatgta
gcagatgagttgcagcttcctcctcaggaggagtgcctttcttggctcactttatcccca
acagaagagcacttttaccaaaggcaacatgaaacttgtgtgacttatgcccgagaagtc
attgaaagtttgaaagatgatattctgaaaagaaaagtcagaggctgttcagcatctaat
gattcatcagatcctttcctcacgcatgcagaggcgggaaagctgctgaacacactcttg
aagcttcgccaggcctgctgccaccctcaagtagggagctctgggcttcgctctctacaa
cagtaccccatgactatggaggaaatattaatggttcttgtaggtaaaacaaagatggaa
ggagaagaagcgctcaggggattagttgttgctctcaatgggcttgctgggatagctgta
attgagcaaaatttcactcaagctctatcactgtacaaggaagcattggctttagctgaa
gagcactctgaggatttccgcctggacccgttgttgaatattcacatttatcataatctt
gctgaaatacttccattggcaacaaactgttgcccctcaaaggaacagtttccgggtagc
tctacggaaatggcctccaagatacatggcattgaaaagtgtgatcaacatgtagtgaag
aggcgaaaactgagtgggaaagacaactttgccattggtgcttgtaacttacttgaaagc
acatctgaattatcagataatgaacaaaagtacctgtctgcgttcagtgatgtatctttg
agaacagcctgtgacaatattaaacagaagtacttgtctgcgttcagctcaaagctatcc
acagctcaacaagagtttaagaagtcttacacacaggtttgtaatgcaattagcgaaaga
aaagatctaagtgcagtttggtggttggaagcccttcttcattctgaaaagaacaaaggc
ttctctagtgagttgaccagaaagattgaagaggccctcataggaactctaaacaattcg
aagtcatcgaggattgcgtcccgtttccaaagtataagtggtctgaagtatcatatacag
actggtttggaccaattagaagcatctaggaagctgttacttgatcgactcttagaaatt
gatcagacgatggagaagccaaaggaggaggatattcaaagtgtgagatactgtcgaaat
tgcaaggcttatgatgatggtcccctgtgtgttctctgtgaagtagatgagttgtttcag
ggttatgaagcaaggctctttcgtagtgaaaaaatatgtggggggatggctacatcagct
gaagaggctgtggatttgcagaagaagaactctgcacttaatcgtttttatcagaatctg
tcgctgccaaataaagatttaacgtcacccagttataaagaatcgaagaagagagatgtt
ggaaaagttgtggtttcaaaatctccatctgaattagaggtcgttcttggagttataaaa
agccattgcaaggcccaaatagggagggaaggtatatccgaagccaccaagcacctacag
attcttgagggcatgcgcaaggagtatggccatgcaagatcgttggcaatagcccaagcc
caaattctacaagcttatgacgaaattaatatggcaacctcaagattgcgcctggcagaa
aatgagaatgataaatctcttgatgctttaagtgaacatgaattaccttcagctaacgtc
ctatacactagcgacaagttcacatccttgcagttgttgtcttgcataaaagggaaactt
cgctatttaaagggtctggtacaagctaaacagaagacgccattggaaagtccaaatcat
tcctcagtagctgaagaggcagccaccatgtcaacttctacagaacagaaaaatgaatgc
atacttactggtgataaagaagcatgcccggtttgtcaagaaacattaaccattcgaaag
atggtttttccatgtgggcatgttacatgctgtaaatgtttatttgcaattacggagtgg
agattacttaatgataagaaggttcaagataagtgggtaaaatgcccaacgtgtcgacaa
catactgatgttgaaaatattgcttatgctgatgatggacaaagtgaatcttctcgttct
tctatgcttcatgcaacccagagtcgtgaaaaggatgaagcatctattacagttaaaggt
tcatatggtaccaagattgaagcagtcacgagaagaatcctctggataaagactacagat
ccagaggctaaagtccttgttttctcaagctggcatgatgtccttaatgtattggagcat
gccttcactgctaatggcattacccatattcggatgaaaggaggaaggaaatcacaagtt
tccattagcgaattcaaaggagaaaagagaagcacaaaaggaaatcacaagatacacggc
caggaaccagaacaaagacctgttcaagtattactgctcttaattcaacatggagctaat
ggcctcaatcttctagaggcgaagcatgttattcttgttgagccacttctcaatccagca
gtagaagcacaagcaatcagccgggtacaccgaatcggacagaaaaacaggaccatagct
catcgtttcatagttaaaggcacagttgaagagagtatatataaactcaatcagagcaag
aacaccactgccttcattaacgggaacacaaagaatcaagatgaaccttttttgacatta
aaagacattgaatccttatttgcaacagcgccacccgctgtaccagaagctgatgaaaag
ccaactgagggttccgatgaaaaggaaactgagagtctaaggcatttgcctccttctgtg
gctgctgctatagcagctgaaaagagacagaaggagcagcatgcatgttcttcatga
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integrated database retrieval system
