Prunus persica (peach): 18788426
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Entry
18788426 CDS
T03092
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
pper
Prunus persica (peach)
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18788426
03036 Chromosome and associated proteins [BR:
pper03036
]
18788426
Enzymes [BR:
pper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
18788426
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
18788426
Chromosome and associated proteins [BR:
pper03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
18788426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MOV-10_beta-barrel
AAA_11
Motif
Other DBs
NCBI-GeneID:
18788426
NCBI-ProteinID:
XP_007225167
UniProt:
M5XLH8
LinkDB
All DBs
Position
G1:4973645..4977102
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AA seq
688 aa
AA seq
DB search
MSIFLEVLKCLFCIEDERENYDYNQIPRQTYDSKISYRNRSPPLTSTNQSPAFYNYKAPS
PPSQPVKSPFSSSSSSPKPPTSSSKPLQSSYISTSSPSPKFPTSSSSSTFPKPPTSSSKL
PQSTFVNPSSSNASPFILEFPTSVSKLQQSSSVDQRSALPKPPTSSSKLPQSTLVSPSSP
SLQLRTPSSRPSPPILSTSSFKPPQASSKSHSSSPNPPTSSKPSPSSGRPASSTTLPPIF
KQVLSPASSDVINEKGKKSYVSVEKGSLPIFTIPEDFKDLIKNDIVPKVLKQPLSPTTYK
DYFAALLYAEEFYHEKWADFNMKNVTLKLQKASVYKNLDKEEKTFVEFMIDSVPENRPFL
LSRDLVYVRPSGTNAEQFQGIINRIIRSNLVLVEFEYEFYDYHYSTQKYDVSFSFNRVCL
KRAHQAVQTASDTLFQNFLFPDGVSRTSIPTAPALLSGRHKLDAKQLSAVRQILSIKGSP
PYLVAGQLCVERNVFRPSRTGAVVCEAVHQLCQTSLKNRILICAPSNSCCDGIMRSLLKV
IPESDMFRANAAFREKDEVPDDILPSCLYEDPYFSCPPTEKLKKFRVIFSTLMSSFRLHD
KGLTSGHFSHIFLVDASSAIEPETAVALTNFAEKSTTVIVTGQPGDNSRWVRADMARQKG
LKISYFERLLKSRPYRSLNPMLITQLDQ
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatttttcttgaagttttgaaatgcctcttttgtattgaagatgagcgtgagaat
tatgattataatcagattcccagacaaacttatgattctaaaatttcctatagaaaccgc
tccccacccttgacttctactaatcaatctccagccttctataactataaagccccatca
cctccatctcaaccagtcaaatctccctttagttcatcttcatcatcccctaagcctccg
acatcttcatcgaaaccgctgcaatcttcttatatcagtacatcttctccatctcctaaa
ttcccaacatcttcttcttcttcaacattccctaagcccccaacatcttcatctaagctg
cctcaatcaacttttgttaatccatcttcttccaatgcatctccatttattcttgaattc
ccaacatctgtatctaaactacaacaatcttcttctgttgatcagcgttcagcattgcct
aaacccccgacatcttcatctaagctgccccaatccactcttgttagtccatcttcacca
tcccttcaactccgaacaccttcatctagaccatctcctcctatactgtctacatcctcc
tttaaaccacctcaggcttcatcaaaatcacattcatcatcgccaaatcctccaacatct
tcaaaaccatcaccatcctcgggacggccagcgtcttccactacactccctccaatcttt
aagcaagttctatccccagcctcctcagatgtaataaatgaaaaggggaagaaaagttat
gtatcggttgaaaagggttcattacctatattcacgattcctgaggatttcaaagatttg
atcaagaatgacattgtgcctaaagttcttaaacagcctctgtctcccacgacatataag
gattactttgctgctctgttatacgctgaagagttctaccatgagaaatgggctgatttc
aatatgaagaatgtgacactgaagttgcaaaaagcatcagtttacaaaaatctggacaag
gaagagaaaaccttcgtagaatttatgattgattctgttcctgaaaatcggccattcctt
ttgtcgagggacttagtctatgtgaggccatcaggtacaaatgctgagcagtttcagggc
attataaatcgcattattaggagcaatcttgtattagtggaatttgaatatgaattttat
gattatcattattcgacccaaaaatatgatgtcagcttctcattcaatcgagtatgtttg
aaaagagctcaccaagcagttcaaacagcatcggatactttgtttcagaacttcctcttt
cctgatggtgtttcccgtacgagcattcccaccgcaccagcgctgctgtctggccgtcac
aaacttgacgccaaacaattatctgctgttcgtcaaattttaagcattaagggctcacca
ccttacttggtggctggccagctttgtgttgaaaggaacgtttttaggccgtcgagaact
ggagcagttgtttgtgaagcagtgcaccagttatgtcaaacctcactcaaaaataggatt
ctgatatgtgctcctagtaacagctgttgtgatgggattatgagaagcttgttgaaagtg
attccagagtcagatatgtttcgagccaacgctgcattccgtgagaaagatgaggtgcct
gatgacatcctcccatcatgcctttacgaagacccttatttctcttgtcctccaactgag
aagcttaaaaaattcagggtgattttctcgactctcatgagtagctttcggctacatgat
aaaggcctaacttctggacattttagtcatatttttctggtagatgcttcatctgccatt
gagccagaaacagcagtggccttaactaattttgcagaaaaaagtactactgttatagtc
actggtcaaccaggagataattcacgttgggttcgagcagacatggcaaggcaaaaggga
ctgaagatttcatacttcgagagacttctcaagtcaaggccatatagaagcctcaaccca
atgcttatcacacaactggaccagtag
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