Pseudomonas putida F1: Pput_1516
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Entry
Pput_1516 CDS
T00537
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ppf
Pseudomonas putida F1
Pathway
ppf00470
D-Amino acid metabolism
ppf00550
Peptidoglycan biosynthesis
ppf01100
Metabolic pathways
ppf01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pput_1516
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pput_1516
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Pput_1516
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppf01011
]
Pput_1516
Enzymes [BR:
ppf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Pput_1516
Peptidoglycan biosynthesis and degradation proteins [BR:
ppf01011
]
Precursor biosynthesis
Amino acid ligase
Pput_1516
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp_3
RimK
ATPgrasp_ST
ATP-grasp
GARS_A
CPSase_L_D2
Ins134_P3_kin
TTL
Motif
Other DBs
NCBI-ProteinID:
ABQ77673
UniProt:
A5W0L3
LinkDB
All DBs
Position
complement(1699466..1700380)
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AA seq
304 aa
AA seq
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MIENIAIITGGNSSEREVSLQTSEAVSQSLKTLQISHEIFTISDYRELLSLDLAKFTRVF
LALHGGFGENGMAQAYLEGLGIPYNGPSPQASAICMDKLLTKHIARGLGINVANYLYSKN
GDDVCFEEISERLGTPCIVKPNREGCSFGVSLVRDLKADLQPAINAAAKFHTGILIEEFI
SGPELSVCYLNKSTLPIYTVEFESDFFSYDAKFISTKTNATLSILDRSTHQLVTNYCSAI
AEALELDYFRADFIVHNTEPYLIELNTLPGLTSHSLFPKACQQHGIEFDKLVLILNNLDP
SQYC
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaatattgcaattataacgggtggaaactcctcggagcgggaggtttccctt
caaacttccgaagctgtctcacaatcgttgaaaaccctccaaatcagccatgagattttc
accatttcggactatagagaactgcttagtctggacctcgctaaattcaccagagtcttt
ttggcgcttcatggcggtttcggtgaaaacgggatggcacaagcatatttagaaggacta
gggatcccatataatggcccttctcctcaggccagcgcaatctgcatggacaagcttcta
acgaagcatattgcaagaggacttggaataaatgtcgcaaactatctttactcgaaaaac
ggtgatgacgtttgttttgaagaaatcagtgaacgcctaggaacaccctgcatcgtcaaa
cctaaccgtgaaggatgtagcttcggtgtgtctctggtccgcgacctcaaagctgacctc
cagcctgctataaacgcagcagcaaaatttcacactggaattctaatagaagaatttata
agtgggcccgagttatccgtatgctatttaaacaaatccacgctacccatctatacagtt
gaatttgagagtgatttcttctcttatgatgcgaaattcatatccaccaagacgaatgcc
accctctccatcctagacaggagcacccatcaactagtcaccaactactgctctgctatc
gctgaggcacttgagcttgattactttagagcagacttcatcgtccacaacacagagccg
taccttattgagcttaacacccttcccgggcttacaagccatagtctttttccgaaagca
tgccagcaacatggtatcgaatttgacaaactggtacttatcttaaacaacttggatcct
agccaatactgctga
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