Pseudomonas putida GB-1: PputGB1_4225
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Entry
PputGB1_4225 CDS
T00650
Name
(GenBank) RNA-binding S4 domain protein
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
ppg
Pseudomonas putida GB-1
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppg03009
]
PputGB1_4225
Enzymes [BR:
ppg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
PputGB1_4225
Ribosome biogenesis [BR:
ppg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PputGB1_4225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S4
Hemerythrin
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ABZ00114
UniProt:
B0KTL6
LinkDB
All DBs
Position
4725632..4726342
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AA seq
236 aa
AA seq
DB search
MSEPVRLSKRLIEQLGCSRREAEQYIEGGWVTVDGVVVEQPQFKVEQQRVELLPGARAET
LEPVTLLLNQPAGVDSETARASMNMASLSEAHREGVRALHGHFARQDCVAPLERGASGLQ
VFTQDWRVTRKVEADLRRLEQEFIVEVRGETTPQALERLARGATRNDRELPKAKASWQNE
THLRMVLKNPQPGQISELCAYLRLELISMRRIRLGGVSMGKLPLGQWRYLATTERF
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacccgtccgcctgtccaaacgcctcatcgagcagctcggctgctcccgccgc
gaggccgagcagtacattgaaggaggctgggttactgtcgatggcgtggtggtcgagcag
ccgcagttcaaagtcgaacagcagcgcgtcgaactgctgccgggcgcccgtgccgaaacc
ctggagccagtgaccctgctgctgaatcagccggccggcgtggacagcgaaaccgctcgt
gccagcatgaacatggctagcctcagcgaagcccaccgcgaaggcgtgcgcgccctgcac
gggcattttgcccggcaggactgcgtggcaccgctggagcgtggggccagcggcctgcag
gtgttcacccaggactggcgggtaacccgcaaagtcgaggcggacctgcgtcgcctggag
caggaattcatcgttgaagtgcgcggcgagaccacgcctcaggcgctggagcgcctggcg
cgcggggccacgcgcaatgaccgcgagctgcccaaggccaaggccagttggcagaacgag
acccacctgcgcatggtgttgaaaaacccacaaccagggcagatttccgagctttgcgcc
tacctgcgcctggagctcataagcatgcgccgcattcgcctgggtggcgtgtccatgggc
aagctgcctttgggccaatggcgctacctggccactaccgaacgtttctaa
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