Pelodictyon phaeoclathratiforme: Ppha_1810
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Entry
Ppha_1810 CDS
T00731
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pph
Pelodictyon phaeoclathratiforme
Brite
KEGG Orthology (KO) [BR:
pph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pph03019
]
Ppha_1810
03009 Ribosome biogenesis [BR:
pph03009
]
Ppha_1810
04131 Membrane trafficking [BR:
pph04131
]
Ppha_1810
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pph04147
]
Ppha_1810
Messenger RNA biogenesis [BR:
pph03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Ppha_1810
Ribosome biogenesis [BR:
pph03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Ppha_1810
Membrane trafficking [BR:
pph04131
]
SNARE
SNARE associated proteins
Others
Ppha_1810
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Ppha_1810
Exosome [BR:
pph04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Ppha_1810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_22
AAA_14
AAA_5
AAA_33
AAA_18
AAA_2
TIP49
AAA_28
IstB_IS21
TsaE
Zeta_toxin
AAA_24
RNA_helicase
nSTAND3
AAA_25
AFG1_ATPase
Parvo_NS1
AAA_17
DUF815
NACHT
AAA_19
AAA_7
ATPase_2
AAA_3
Mg_chelatase
bpMoxR
PhoH
Sigma54_activ_2
PIF1
AAA_11
Vps4_C
Motif
Other DBs
NCBI-ProteinID:
ACF44042
UniProt:
B4SBI8
LinkDB
All DBs
Position
complement(1914481..1916628)
Genome browser
AA seq
715 aa
AA seq
DB search
MSNTELVLKVKEAIVKDVGRAIARIDPNDMVHAGLESGDIVLIEGKRSTPVKILPSYPND
RDKGIIQIDGITRENAIVGIDEKVLIHKTTIRKATKIKLKPVTKSSSLIKADDAKYIGSL
INGLPVSNGDKIKATLFGSGSIYYTISSTVPDGVVLIHPDTSIQLESSKQNEVKSNKITY
EDIGGLGNQVQRIREMIELPLKYPEIFERLGVEPPKGVFLYGPPGTGKTLIVRAVAQETD
AYFINISGPEIMGKYYGESEARVRNIFAEAQSHAPSIIFIDEIDAIAPKREDMGGEKQVE
KRVVAQLLSLMDGLESRGKVIVIGATNIPNSIDPALRRPGRFDREISISIPDKKGRLEIL
HIHTRGIPLSEDVDMSKIADITHGFVGADLEALAREAAMTALRKILPRINFELSEIPYEL
LMQLEVTMDNFLDAMKEVEPSAIREVFVEVPDVKWEDVGGLDEIKQALKETVEWPLKYAE
LFKKTDTNPPKGIILYGKPGTGKTYLAKALASESGVNFISVKGPQILNRFIGESEKGVRE
LFRLAKQSAPTILFLDEIDSLAPRRRNDGVESGVIDRVISQFLTEMDGIEELKGVTVLAA
TNRIDRIDPALLRSGRFDLMFEVPLPDLSTREMIFKIHTKNMPLKESVSLNALAEKTDNM
TGADIQFICQKAKMVAIRELIDKKVDSETIEIIITEEHFEHAIQVVSNQATNRQN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatactgagttggtcttaaaagtcaaagaggcaattgttaaggatgtagggcgt
gcaattgcgagaattgatccgaatgatatggttcatgctggtttggaatcgggtgatatt
gtccttattgagggaaaacgctccactccagttaaaatacttccttcttaccctaatgat
cgagataagggaatcatacagattgatggaatcactcgagaaaatgccattgttggaata
gacgaaaaagttctaatacataaaacaacaatacgcaaggcaacaaaaataaaactcaag
ccggtaacaaaatcaagctctttgattaaggctgatgatgcgaaatatattggttctctt
ataaatggtttaccggtttctaatggtgataaaattaaggcgacattatttggttccgga
tcgatatattatacgatttcatcgaccgtacctgatggagttgttttgatacatcctgat
acatcaatacaacttgaatcttcaaaacaaaatgaagtaaaatcaaacaagattacatac
gaagatataggtggacttggtaatcaagttcagcgaatacgtgaaatgattgaattaccc
ctaaaatatcctgaaatatttgaaaggttaggagtcgaaccaccaaaaggtgtttttttg
tatggacctccaggtacaggaaagacgcttattgtgagagccgtcgcacaagagaccgat
gcttattttataaatatatccggccctgaaattatgggcaagtattacggcgaaagcgaa
gcaagagtacgtaatatatttgctgaggcccagtctcatgcgccgtctataatatttatt
gatgaaatagatgcaatcgctccaaaacgggaggatatgggtggcgaaaagcaggttgag
aaaagggttgtagctcagcttttatccttgatggacggtttggagtcaaggggcaaagtt
attgtgattggagcaacaaatattccaaattctattgatcccgcgcttagaaggccagga
cgtttcgatcgtgagatatcaatttctattcctgataaaaagggacgacttgaaatactt
catatccacacaaggggtattcccttgtcagaagatgtggatatgtcaaagattgctgat
attacccatggttttgttggagctgatcttgaagctcttgctcgcgaagcggctatgaca
gcgttaaggaaaattcttccaaggattaactttgaattatcagaaataccatacgagcta
ttaatgcagttagaagttacgatggataattttcttgatgcgatgaaagaggtcgaacct
tctgctatccgtgaagtatttgttgaggttcctgatgtcaagtgggaagatgttgggggg
cttgatgagattaagcaggcattgaaagagaccgtagagtggcctctaaaatatgctgaa
ctatttaaaaaaacagataccaatcctccaaagggtataatattatatggtaagcctggc
acaggaaaaacataccttgctaaagcgcttgccagtgagagtggagtaaactttatttct
gtaaaaggtcctcaaatacttaaccgttttattggagaatctgaaaaaggggtaagagaa
cttttcaggcttgcgaaacaatcagcgcccacaattctctttcttgatgaaatagatagt
cttgctccacgaagaaggaatgatggcgtagaatcaggagttattgacagagtaatcagt
caatttctcacagaaatggatggtattgaggagttaaaaggggtcactgtgcttgctgca
acaaatagaattgatcgtattgatcccgctttattacgatcaggaagatttgatctcatg
tttgaagttccattaccggatttatcaacaagagagatgatttttaaaatacatactaaa
aatatgcctctaaaagagagtgttagtctaaatgcacttgccgaaaaaaccgataatatg
actggcgcagatatacagtttatatgtcaaaaggctaaaatggttgctattcgtgaactg
attgataaaaaagtcgattcagaaactatagaaataattataacagaagagcattttgaa
catgcgatacaagtagtcagcaatcaggcaacaaatagacaaaattaa
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