Pseudoalteromonas phenolica: PP2015_1997
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Entry
PP2015_1997 CDS
T04165
Name
(GenBank) recombinase RecR
KO
K06187
recombination protein RecR
Organism
pphe
Pseudoalteromonas phenolica
Pathway
pphe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pphe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PP2015_1997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphe03400
]
PP2015_1997
DNA repair and recombination proteins [BR:
pphe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PP2015_1997
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PP2015_1997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_C
RecR_ZnF
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ALO42495
UniProt:
A0A0S2K352
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All DBs
Position
I:complement(2303773..2304375)
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AA seq
200 aa
AA seq
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MQLSGTLSQLIEALRCLPGIGPKSAQRIAFHLLERDREGGSQLGQSLTKAMQVIGHCQTC
RTFCEEPECSLCQNIKRQDSRLLCVVESPTDVLAIEQTGQYTGLYFVLMGHLSPLDGIGP
NEIGLDVLERRLSDGNIDEVILATNPTVEGEATAHFISELCQKYDVLASRIAHGMPVGGE
LDLVDGMTLMHAFSGRKAIT
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgcaactatctggaaccttatcacaactcattgaagccttgcgctgtttacctggcatt
ggcccaaaatcggctcagcgtatagcttttcacttgcttgaaagagacagagaaggcggc
agccagttaggccaaagccttactaaagcgatgcaagttattgggcattgccaaacttgt
cgcacgttttgtgaagagccagagtgttcgctatgtcaaaatatcaaacgccaagatagt
cgcttattatgtgtggttgaatcaccaacagatgtgcttgctattgagcaaactggtcag
tacacaggcttgtattttgtattaatggggcatttatcaccgttagacggtattgggcca
aatgagattggtttagatgtactagagcgtcgtttatcagatggtaatatcgatgaggtg
attctcgccactaatccaaccgtagaaggtgaagcaacagcacattttatctctgagctt
tgtcaaaaatatgatgtactcgcttctcgtattgctcatggtatgcctgtaggtggcgag
cttgatttggtcgatggcatgacgcttatgcatgcgttttcagggcgaaaagccattacc
taa
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