Pannonibacter phragmitetus: APZ00_00300
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Entry
APZ00_00300 CDS
T04214
Name
(GenBank) ATP-dependent DNA ligase
Organism
pphr
Pannonibacter phragmitetus
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
Motif
Other DBs
NCBI-ProteinID:
ALV25706
UniProt:
A0A0U2VZC9
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Position
complement(62641..64287)
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AA seq
548 aa
AA seq
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MRAFSRLLDRLAFESSRNAKEALLVDYFRRTPDPDRGYALAALTGTLEFRHAKPAMLRAL
AGERTDPVLFALSYDFVGDLSETVALMWPAPGRAGEAGGEGPGLSAVVQRLAGAGRSEVP
QLIAGWLDLLDETSRWALLKLVTGGLRVGVSARLAKTALARLGTVSVDEIEEVWNAQKPP
YTALLAWVEGQGSKPEASDPAPFRPPMLAHPLDEARDVEALDPAQFLAEWKWDGIRVQAS
AGRDAAGRRVARLYSRSGDDISAAFPDVLESLTFEGCIDGELLILRDGAVQPFSELQKRL
NRKTAAPKLMQQLPAAIRAYDLLMDNGEDLRALPFEQRRARLEAFLIAQAPPRIDLSPLV
PFANWEELARWREEPSAHLPEADAGAVEGLMLKRRQSPYLAGRPRGEWFKWKRDPFTVDA
VLMYAQRGHGKRSSYYSDYTFGVWRDEELVPVGKAYSGFTDEELLEIDRFVRNNTVNRFG
PVREVAHTPDLGLVLEVAFEGLNRSGRHKSGLAMRFPRIARLRWDKPPHEADRIEILEAL
LPAAASVA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgccttttcccgccttctggaccgtcttgcctttgaaagctcccgcaatgccaag
gaggcgctgctggtggattatttccgccgcacgcccgatccggaccggggctatgccctt
gcggcgctgacgggcacgctggagttccgtcacgccaagcctgcaatgctgcgggcgctg
gcgggggaacggacggacccggtgctcttcgcgctgtcctatgatttcgtcggcgatctg
tccgagacggtggcgctgatgtggcccgcgcccggccgggccggcgaagccggtggcgag
gggccgggactttccgccgtggtgcaacggcttgctggcgctggccgcagcgaggtgccg
cagctgattgccggatggctggaccttctggatgagacgagccgctgggcgcttttgaag
cttgtcaccggcggcttgcgggtgggtgtatccgcccgcctcgccaagacagcgctggcg
cggcttggaactgtcagcgtggacgagatcgaggaggtctggaacgcgcagaagccgccc
tatacggcgctgctggcctgggtggaggggcagggcagcaagccggaagcctcggacccg
gcgcccttccgcccgccgatgctggcgcacccgctggatgaggcgcgggacgtggaggcg
ctggatccggctcagtttctggccgaatggaaatgggacggtatccgcgtgcaggcttca
gccgggcgagatgcggcgggcaggcgtgtggcgcggctttactcccgctccggcgatgac
atttccgccgcctttcccgatgtactggagagcctgaccttcgagggctgtatcgacggg
gaactgctgatcctgcgcgatggtgcggtgcagcccttttccgagctgcagaagcggctg
aaccgcaagacggcagcaccgaagctgatgcagcagcttccggccgccatccgggcctat
gatcttctgatggacaatggagaagacctgcgcgccctgccgtttgagcaaaggcgggcg
cgactcgaggctttcctgatcgcacaagccccgccgcgcattgacctgtcgccgctggtg
ccctttgcgaactgggaggaactggcccgctggcgggaggagccttccgcgcatctgccg
gaggctgatgcaggcgccgtggaagggttgatgttgaagcggcggcagtcgccctatctg
gcagggcgtccacgcggggaatggttcaagtggaagcgcgatcccttcacggtggacgcg
gtgctgatgtatgcgcagcgcggccacggcaagcgctcgtcctattattcggactatacc
ttcggcgtctggcgggacgaggagcttgtgccggtgggcaaggcctattccggctttacc
gatgaggaactgctggagatcgataggttcgtccgcaacaacaccgtcaaccgcttcggt
ccggtgcgggaagtggcgcatacgcccgatctggggctggtgctggaagtggcgttcgag
gggctgaaccgttccggccggcacaaatccggccttgccatgcgctttccccgcatcgcc
cgcctgcgctgggacaagccgccgcatgaggccgaccggatcgagatcctcgaggccctg
ttgccagcagctgccagcgtggcttga
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