Pannonibacter phragmitetus: APZ00_17190
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Entry
APZ00_17190 CDS
T04214
Name
(GenBank) formate dehydrogenase
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr00630
Glyoxylate and dicarboxylate metabolism
pphr00680
Methane metabolism
pphr01100
Metabolic pathways
pphr01120
Microbial metabolism in diverse environments
pphr01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
APZ00_17190
09102 Energy metabolism
00680 Methane metabolism
APZ00_17190
Enzymes [BR:
pphr01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
APZ00_17190
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_10
Fer4_6
Fer4_9
Fer4_21
Fer4_2
Fer4_18
Fer4_8
Fer4_16
Fer4_4
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
ALV28581
UniProt:
A0A0U3PA11
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Position
complement(3746587..3749466)
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AA seq
959 aa
AA seq
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MKDSRLLDRDFGTPAARSEKMITLTVDGFEVSVPEGTSVMRAASEAGISVPKLCATDMLD
AFGSCRLCLVEIEGRAGTPASCTTPVAPGMVVHTQTGKLKDLRKGVMELYISDHPLDCLT
CAANGDCELQDMAGAVGLRDVRYEAVDTHFRARNAGGDVNPQWLAKDESNPYFTYDPSKC
IVCSRCVRACEEVQGTFALTIEGRGFDSRVSAGMMSDTFLSSDCVSCGACVQACPTATLQ
EKSVIEIGTPERAVVTTCAYCGVGCSFKAEMRGDELVRMVPYKDGKANRGHSCVKGRFAW
GYAQHQDRILKPMIREAITDPWREVSWDEALNFAAARMKAIQEKHGRQSVGVITSSRCTN
EETYLVQKLTRAVFLNNNTDTCARVCHSPTGYGLGQTFGTSAGTQDFDSVEDTDVVIVMG
ANPTDGHPVFASRLKKRLRQGAKLIVIDPRRIDLVKSPHIKAAHHLQLKPGTNVAVVSAI
AHTIVTEGLFDEAFIRERCDWDEFQDYAEFISDPRHSPEATAALTGVPAEELRAAARLYA
RGGNGAIYYGLGVTEHSQGSTTVIGIANLAMMTGNIGRKGVGVNPLRGQNNVQGSCDMGS
FPHELPGYRHVKNDHVREIFESLWGVELDKEPGLRIPNMLDAAVDGTFKGLYCQGEDILQ
SDPDTKHVAAGLAAMDCVIVHDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRINRVRK
VMAPKNGYADWEITQMLANAMGANWTYTHPSQIMAEISLTTPSFAGVTYEKLEELGSVQW
PCNEKAPEGTPLMHIDGFVRGKGKFIRTEYVATDERTGPRFPLLLTTGRILSQYNVGAQT
RRTANTVWHAEDLLEIHPHDAENRGLKDGDWVRLASRSGETTLRAKVTDRVSPGVVYTTF
HHPDTQANVITTDFSDWATNCPEYKVTAVQISPSNGPSTWQEDYAAQAAQSRRILPAAE
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgaaggactcccgtttgctcgaccgtgacttcggcacccccgccgcccggtccgaaaag
atgatcaccctgaccgtcgatggcttcgaggtcagcgtgccggaaggcacctccgtcatg
cgtgccgcatccgaagcgggcatttccgtgcccaagctctgcgccaccgacatgctggat
gccttcggctcctgccgcctgtgccttgtcgagatcgagggccgcgccggaacgccggct
tcctgcaccacgccggtggcgccgggcatggtggtccacacccagaccggcaagctgaag
gacctgcgcaagggggtgatggagctttacatctccgaccacccgctcgactgcctgacc
tgcgctgccaatggcgactgcgagctgcaggatatggccggtgccgtgggcctgcgcgat
gtgcgctatgaggccgtggacacccatttccgcgcccgcaatgccgggggcgatgtcaat
ccgcagtggctggccaaggacgagagcaacccgtatttcacctatgatccgtccaaatgc
atcgtctgctcccgctgcgtgcgggcctgcgaggaagttcaaggcaccttcgcgctgacc
atcgagggccgtggcttcgacagccgcgtctcggcgggcatgatgagcgacacgttcctc
tcctccgactgcgtctcctgcggcgcctgcgtgcaggcctgcccgacggcaacgctgcag
gaaaagagcgtgatcgagatcggcacgcccgagcgggccgtggtcaccacctgcgcctat
tgcggcgtcggctgttccttcaaggcggaaatgcgcggcgatgagctggtgcgcatggtg
ccctacaaggacggcaaggccaaccgcggccacagctgcgtcaagggccgctttgcctgg
ggctatgcccagcatcaggaccgcatcctcaagccgatgatccgcgaggcgatcaccgat
ccctggcgcgaagtctcctgggacgaggcgctgaactttgccgccgcccgcatgaaggcc
attcaggaaaagcatggccgccagtctgtcggcgtcatcacttcctcccgctgcaccaat
gaggaaacctatctggtgcagaagctgacgcgcgcggtgttcctcaacaacaacacggac
acctgcgcccgcgtctgccattcgcccaccggctacggcctcggccagacattcggaacc
tctgcggggacgcaggacttcgacagcgtcgaggacacggatgtggtcatcgtcatgggg
gccaacccgacggatggacacccggtcttcgccagccgcctgaagaagcgcctgcgccag
ggcgcaaagctgatcgtcatcgatccgcgccgcatcgatctggtgaagtcgccgcatatc
aaggccgcgcatcacctgcagctgaagcccggcaccaacgtggccgtggtttcggccatc
gcccacaccatcgtcaccgaaggcctgttcgacgaggccttcatccgcgagcgctgcgac
tgggacgagttccaggactatgccgagttcatctccgatccgcgccacagcccggaggca
acggcagccctcaccggcgttccggcggaagagctgcgcgctgccgcaaggctttatgcc
cgcggcggcaacggggcgatctattacggcctcggcgtcaccgaacactcgcagggctcc
accacggtcatcggcatcgccaaccttgcgatgatgaccggcaacatcggccgcaagggc
gtgggcgtgaacccgctgcgcgggcagaacaacgtgcagggctcctgcgacatgggctcc
ttcccgcatgaactgcccggctaccgccatgtgaagaacgaccacgtgcgcgagatcttc
gagagcctgtggggcgtggagctggacaaggaaccgggcctgcgcattcccaacatgctg
gatgccgccgtcgacggcaccttcaagggcctctactgccagggcgaggacattctccag
tccgacccggacaccaagcacgtggccgcaggccttgccgccatggactgcgtgatcgtg
catgacctgttcctcaacgaaacggccaattacgcccacgtgttcctgcccggctcgacc
ttcctggaaaaggacggcaccttcaccaatgccgagcgccgcatcaaccgcgtgcgcaag
gtgatggccccgaagaacggctatgccgactgggagatcacccagatgctggccaatgcc
atgggcgccaactggacctacacccacccctcgcagatcatggcggaaatctcgctgacg
acgccgtccttcgcaggcgtcacctacgagaagctggaggaacttggctcggtgcagtgg
ccctgcaacgagaaggccccggaaggcacgcccttgatgcatatcgacggcttcgtgcgc
ggcaagggcaagttcatccgcaccgaatatgtggcaacggacgagcgcaccggcccgcgc
ttcccgctgctgctgaccacgggccgcatcctcagccagtataacgtgggtgcccagacc
cggcgcaccgccaacacggtctggcacgcggaggatctcttggaaatccatccgcatgat
gcggaaaaccggggcctcaaggatggcgactgggtgcgccttgccagccgctcgggcgag
acgaccctgcgcgccaaggtcaccgaccgggtgtcgccgggcgtggtctacaccacgttc
caccatccggacacgcaggccaacgtcatcaccaccgacttctcggactgggccaccaac
tgccccgagtacaaggtgacggcggtgcagatcagcccgtccaacggcccctccacctgg
caggaggactacgccgcacaggctgcccagtcccgccgcattcttccggcggccgaatga
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