Pannonibacter phragmitetus: APZ00_23765
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Entry
APZ00_23765 CDS
T04214
Name
(GenBank) urea carboxylase
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr00220
Arginine biosynthesis
pphr00791
Atrazine degradation
pphr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
APZ00_23765
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
APZ00_23765
Enzymes [BR:
pphr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
APZ00_23765
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Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
HlyD_3
ATP-grasp_5
GCV_H
RnfC_N
RimK
Motif
Other DBs
NCBI-ProteinID:
ALV29687
UniProt:
A0A0U3MZH8
LinkDB
All DBs
Position
complement(5218364..5221903)
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AA seq
1179 aa
AA seq
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MFQKVLIANRGEIAVRVIKTLRKMGIASVAVYSDADRFSKAVLMADEAVRLGPAPAAESY
LNVEAVIAACRETGAEAVHPGYGFLSENIGFAERLKAEGITFIGPSPDNIAAFGLKHTAR
ELAKASGVPLLPGSSLIASGTEALAAAEAIGYPVMLKSTAGGGGIGMQLCETPEALGAAF
ETVQRTAQASFGDARVYLERFVARARHVEVQIFGDGKGNVVALGERDCSLQRRNQKVIEE
TPAPGLSAEVRQKLHAAAVALGRQVNYASAGTVEFIYDPAREEFYFLEVNTRLQVEHPVT
EAVFGVDLVEWMIRQAAGEDVLAGAGQLTPKGAAIEARVYAEMPHAGFRPSAGLLTEVRF
PEDVRVDGWVETGTEVTAFYDPMLAKIIVCGKDRASAIEALSTALSQTSLCGIETNHGYL
KAIAASDLFRSGQVATTALRDFAFVPDVIEVIAPGAQSSLQELPGRLGLWHVGVPPSGPM
DEYSFRHANRLVGNADETAALELTVAGPVLRFFSHVRVALSGAEMPALLDGSPVPHNEAF
EVLAGQTLSIGAIKGAGQRTYLAVAGGLDAPVVLGSRATFGLGQFGGNATGTLRAGHVLR
LARAEQAPVKPAGAPAELTREWQVGVLYGPHGAPDFFLEEDIETLFSASYEVHYNSARTG
VRLIGPAPKWARADGGEAGLHPSNLHDNAYAIGAIDFTGDMPIILGPDGPSLGGFVCPAV
IARDEQWKMGQFKPGDRIRFHAAGREGDPLAGPAVRKLGEEAGSPVLATGMAGTVPVVYR
RQGDDNLLVEYGAMQLDIGIRMRVHLLMEAVKAAKLPGLIDLTPGIRSLQIHYDGTSLTR
SRLLGLLAEIEETLPPASEVKVPSRTVWLPLSWNDPDAELAMRKYQELVRPNAPWCPSNI
EFIRRINGLADEQAVKDTIFNAAYLVMGLGDVYLGAPVATPVDPRHRLVTTKYNPARTWT
PENAVGIGGAYMCIYGMEGPGGYQLFGRTIQMWNTWRQTDVFGKDKPWLLDFFDQIRFFP
VSHQELTEARAAFPHGGYPVRIEEGIFSQAEYEAGLAANAAGISAFKQGQQAAFEAERQR
WKDAGLDSFVADEGRGPGLGGDIPQGCTGVESAVPGNVWKVLVEAGQKVEAGETLAIIES
MKMEITVTAHVAGRVSELRAAPGRSIRAGDVLVVLEDAL
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgttccagaaggttctgatcgccaaccgcggcgaaatcgccgtgcgcgtcatcaagacg
ctgcgcaagatggggatcgcaagcgttgcggtctattccgatgccgaccggttttctaaa
gcggtgctgatggccgatgaggctgtgcggctgggccccgccccggcggctgaaagctat
ctcaatgttgaggccgtcatcgccgcctgccgtgagacgggggcagaggctgtccatccg
ggctatggcttcctgtcggagaacatcggctttgccgaaaggctgaaggcggaggggatc
accttcatcggcccctcgccggacaatatcgcggccttcggcctcaagcatacggcgcgg
gaactggcgaaggccagcggcgtgccgctgctgccgggctccagcctcattgccagcggg
actgaagctctcgcagcggcggaggccatcggctatccggtgatgctgaagtccaccgcc
gggggcgggggcatcggcatgcagctgtgcgagacgccggaagcgctgggggccgccttc
gagacggtgcagcggacggcacaggccagcttcggcgatgcccgcgtctatctggagcgc
ttcgttgccagagcccgccatgttgaggtgcagatcttcggggacggcaaggggaatgtg
gtggcgctgggcgagcgggactgctcgctgcagcggcggaaccagaaggtgatcgaggaa
actccggcgccgggtctttccgccgaggtacggcagaagctgcatgcggcagccgtggcg
ctgggccgtcaggtgaactacgcctcggccggtaccgtggagttcatctacgatccggcg
cgggaggagttctacttccttgaggtcaacacccgcctgcaggtggagcatccggtgacg
gaagccgtcttcggcgtcgatctggtggagtggatgatccgtcaggctgcgggagaggat
gtgctggccggtgccgggcaactgacacccaagggggcggccatcgaggcgcgcgtctat
gcggaaatgcctcacgcgggcttccgccccagcgcgggccttctgacggaggtgcgcttt
cctgaagacgtgcgcgtggatggctgggtggagacgggcacggaggtgactgccttctat
gatccgatgctggccaagatcatcgtctgcggcaaggacagggcctcggccattgaagcc
ctttctacagcactgtcacagacatccctgtgcgggatcgagaccaatcacggctatctg
aaggcgattgccgcctcggacctgttccgcagcggtcaggtggcgacgacggcgctcagg
gattttgcctttgtgccggatgtgatcgaggtgatcgcgccgggggctcagtctagcctg
caggagctgccgggccgtcttggcctgtggcatgtgggggtgcccccctcgggaccgatg
gacgaatactccttccgtcatgccaaccggctggtgggcaatgcggatgagacggcagcg
ctggaactgaccgttgccggcccggtgctgcggttcttttcgcatgtgcgcgtggcgctg
tccggggcagaaatgccggcgctgctggacggctcgccggtgccgcacaacgaggccttc
gaggtgctggcaggccagacgctctccatcggagccatcaagggggcaggacagcggact
tatcttgctgttgcaggcgggcttgatgcgccggtggtgctgggctcgcgggcaaccttt
gggcttggacagttcggcggcaatgccaccggtaccctgcgggcgggccatgtgctgcgg
ttggcgcgggcggagcaggctccggtcaagcctgccggtgcgcctgcggagctgacgcgg
gagtggcaggtgggcgtgctgtatggcccgcatggcgcaccggatttcttccttgaggaa
gacatcgagacgctgttttcggccagttacgaggtgcattacaactcggcccgcacgggc
gtgcggctgattggccctgcaccgaagtgggcacgggctgatggcggggaggcggggctg
cacccttccaacctgcatgacaatgcctatgccatcggggccatcgatttcaccggcgac
atgccgatcatcctggggccggatggccccagccttggcggcttcgtctgcccggcggtg
atcgcccgggacgagcagtggaaaatggggcagttcaagcccggcgaccggatccgtttc
catgcggccgggcgcgagggcgatccgctggcggggcccgctgtccgcaagctgggtgag
gaggcggggtcgcctgtgctggcaacgggcatggccgggacagtgcccgttgtctaccgc
cgtcagggcgatgacaacctgctggtcgaatatggcgcgatgcagctcgacatcggcatc
cgcatgcgtgtccacctgctgatggaagcggtgaaagcggcgaagctgcccggattgatc
gacctgacaccgggcatccgctcgctgcagatccattatgacggcacgagcctgacccgc
agccgcctgctgggtcttctggcggagatcgaggagactctgccgccggcctcggaggta
aaggtgccaagccgcaccgtctggctgccgctgtcctggaacgatccggacgcggaactg
gcaatgcgcaagtatcaggaactggtgcgccccaatgcgccctggtgcccctccaacatc
gagttcatccgccgcatcaacggccttgcagatgagcaggcggtgaaggacaccatcttc
aacgcagcctatttggtgatggggctgggggatgtgtatctcggtgcacctgtggcaacg
cctgtcgacccgcgccaccggctggtgacgaccaagtacaatccggcccgcacctggaca
ccggagaacgcggtcggcatcggcggcgcttacatgtgcatctatggcatggaagggcct
gggggctatcagctgttcgggcgcaccatccagatgtggaacacatggcggcagacggat
gtgttcggcaaggacaagccgtggctgctcgatttcttcgaccagatccgcttcttccct
gtctcgcatcaggaactgaccgaagcgcgggccgcctttccccatggcggttatccggtg
aggatcgaggagggcatcttctcgcaggcagagtatgaggctggcctcgcggccaatgcg
gccggcatctccgccttcaagcaggggcagcaggctgccttcgaggcagagcgccagcgc
tggaaggacgcggggctcgacagtttcgtggcggacgaggggcgcgggccgggccttggc
ggcgacattccgcaaggctgcacgggcgtcgaaagcgccgtgcccggcaatgtctggaaa
gtgctggtggaggccggccagaaagtggaagctggcgaaacgctcgccatcatcgagtca
atgaagatggaaatcacggtcaccgcccatgtggccggacgggtcagcgagctgcgtgcc
gcccccggccgcagcatccgggccggtgacgtgctggtggtactggaggatgcactatga
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