Candidatus Pelagisphaera phototrophica: GA004_05025
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Entry
GA004_05025 CDS
T09061
Name
(GenBank) glycoside hydrolase
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht00511
Other glycan degradation
ppht00600
Sphingolipid metabolism
ppht01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
GA004_05025
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
GA004_05025
Enzymes [BR:
ppht01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
GA004_05025
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Gene cluster
GFIT
Motif
Pfam:
BNR_2
BNR_3
BNR
Sortilin-Vps10
Motif
Other DBs
NCBI-ProteinID:
QXD33075
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Position
1132833..1133969
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AA seq
378 aa
AA seq
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MHKFILIFTKILFAQLAFGTLLWGVENTIETQVLFRKAVDGYNNIRIPAICETKDGTLLA
FAEGREAGDKGDIDLIMRRSLDGGKTWSGIEVIWDDKDNTCGNPCPVVDLDTGTIWLLLT
WNLGSDSENAIMTGKSEHPRSPWVTYSNDDGKTWAKPKELPHLRKKDWRWYATGPGNGIQ
LTRGPHKGRLVIPANHSDRITAERDSKTYRSHIIYSDDHGDSWGLGAIQEPLTNESTVVE
LADGLVMQNMRSYHGKGNRAVAVSEDGGISFAPVYLDDGLQSPVCQANILRFSWPEKNRS
RILFSSPTGDKREGITARLSYDEGKTWPVSKMIHEGPGAYSNMVGLTDGNVGLLVEVGES
SPYESIRFITFDINWLEH
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcataaatttattcttatcttcacaaagatactcttcgcacaattagctttcggaacg
ctactttggggagtagaaaatacaatagagacccaagtcctctttcgaaaggcggtggat
ggatacaataacatccgcattcccgctatttgcgaaaccaaagacggaacccttttagcc
ttcgccgaaggtcgcgaggctggcgataaaggcgacatcgatctcataatgcgtcgctcg
ttagatggcggtaaaacgtggagcggaatcgaagtgatttgggacgacaaggataacacc
tgtggaaatccatgtccggttgtagatttggatacaggtactatctggctattactaaca
tggaatctaggaagcgatagcgaaaatgccatcatgaccgggaagagcgagcatccccgt
tcaccgtgggtcacctactcgaacgatgatggcaaaacctgggccaagccaaaagagctt
ccgcaccttcgcaagaaagattggcgctggtatgcaactggtcctggcaacggcattcaa
ctgacgcgaggtccccacaaaggtcgcctggtcattcccgcgaatcattccgatcggatc
actgctgagagagattcgaaaacctatcgctcgcacatcatttactccgacgatcacggc
gatagctggggcctcggtgcgatccaggaaccacttacaaacgagtctaccgtggtcgag
ctcgccgatggcttagtgatgcaaaacatgcgctcttatcacgggaaagggaatcgggcg
gtggccgtaagcgaggacggcgggataagtttcgctccggtttatttggatgacggactt
caatcacccgtttgccaggcgaatatccttcggttcagctggcccgaaaaaaatcgcagt
cgcattctcttttccagtcctaccggcgacaagcgcgagggtattacggctcgcttaagt
tacgacgaaggaaaaacctggccagtcagcaaaatgatacatgaaggtcccggagcctac
tcgaatatggtcggtctcaccgatggcaatgttggactgttggtcgaagttggagagtct
agcccctatgaatcgataagatttatcacgtttgacatcaattggctagaacattga
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