Pseudomonas putida ND6: YSA_02325
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Entry
YSA_02325 CDS
T02170
Name
(GenBank) mechanosensitive ion channel MscS
KO
K22044
moderate conductance mechanosensitive channel
Organism
ppi
Pseudomonas putida ND6
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppi02000
]
YSA_02325
Transporters [BR:
ppi02000
]
Other transporters
Pores ion channels [TC:
1
]
YSA_02325
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
UPF0239
Bacillus_HBL
Mpo1-like
Motif
Other DBs
NCBI-ProteinID:
AFK68025
UniProt:
I3URA4
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Position
1251688..1253835
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AA seq
715 aa
AA seq
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MPALLRYLFLLLLLFIAPVQAAGLPGLLGGSAPAQPEATEPLGKSLDEVIKNLENDQQRA
KLLADLKKLRDATRQSQPSVEQGVLGLIGGALHDFEKQFSGDASPFHRWAAEIEQAQAEL
TELVVPVHQWPPILFGFAAVIVVWSVLAYAFNWVGHRVRLRFGLSEELPQHPRTWDLVRF
ALRKLGPWLVALVFTVYLSFVLPPSLGKSLAMVLAYALVVGTCFSAICVIAFSLLDGPHR
HRALHILRRQAFRPLWLIGSFAAFGEAMSDPRMLVALGTHLAHALATLANVIAALCTGLF
ILRFRRPIAHLIRNQPLSRRLTRRTLSDTIEILGSFWFIPALILVAISLFATFVSAGDTS
TALRQSLMCTVLVVVCMVLNGLVRRHAANPKRASKRQAVYTERLRNFGYLLVHLFIWLVF
IELGLRVWGVSMISFAEGDGHDISLRLLGLAGTLLVAWLVWILADTAVHHALVRSRRGLA
NARAQTMMPLIRNVMFVVIFIIAVIVALANMGMNVTPLLAGAGVIGLAIGFGAQSLVADL
ITGLFIIIEDSLAIDDYVDVGGHLGTVEGLTIRTVRLRDIDGIVHTIPFSEIKSIKNYSR
EFGYAIFRVAIPHSMNIDQAITLVREVGQKLRNDPLMRRNIWSPLELQGVESFESGSAIL
RARFKTAPIKQWEVSRAFNLALKRQLDEAGLDLATPRLSVQVVTAGGGGMTEARS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgccctcctgcgttacctgttcctgttgctcttgctgttcatcgccccggtacaa
gcggcgggcttgcctggcctgctgggcggcagtgcgcccgcgcagcctgaagccaccgag
ccgctgggcaagtcgctggacgaggtgatcaagaacctcgaaaacgaccagcaacgggcc
aagctgctggccgacctgaaaaaactgcgcgacgccacccggcaatcgcaacccagcgtt
gaacagggcgtgctcggcctgatcggcggtgccctgcatgactttgaaaaacagttcagc
ggcgatgccagtccattccaccgctgggccgcagaaatcgaacaagcccaggccgaactg
accgaactggtggtgcccgtgcaccagtggccgccaatcctgttcggttttgctgcagtg
attgtcgtgtggagtgtgctggcctacgccttcaactgggtcggccatcgggtccgcctg
cgctttggcctgagcgaagaactgccacagcacccgcgtacctgggacctggtgcgcttt
gccttgcgcaagctcggcccctggctggtagcgctggtgttcacggtgtacctgagtttc
gtgctgccgccatcgctgggcaaatccctggccatggtgctggcctacgcactggtggtc
ggtacctgcttttcggccatttgcgtcatcgccttttccttgctggacggcccacaccgc
caccgcgccctgcacatcctgcggcgccaggcgtttcgcccgttgtggctgatcggcagc
ttcgccgcgtttggcgaggcgatgagcgatccacgcatgctggttgccctcggtacccac
ctggcccacgccctggctaccctggccaatgtgattgccgcactgtgcaccgggctgttc
atcctgcgctttcgcaggccgatcgcccacctgatccgcaaccagccactgtcgcggcgc
ctgacccgacgcaccctcagcgataccatcgagatcctcggcagcttctggttcattccg
gcgctgatcctggtggccatttcgctgttcgccaccttcgtctccgccggcgacaccagc
accgcactgcggcagtcgctgatgtgcacggtgctggtggtggtgtgcatggtgctcaac
ggcctggtgcgccgccatgccgccaaccccaagcgggccagcaagcgccaggcggtgtac
accgagcgcctgcgcaacttcggctacctgctggtgcacctgttcatctggctggtgttc
atcgagttgggcctgcgcgtgtggggcgtgtcgatgatcagcttcgccgagggcgacggc
catgacatcagcctgcgcctgctgggcctggccggcacgctgctcgtggcctggctggtg
tggatccttgccgacaccgccgtacaccatgccctggtgcgctcgcgccgggggctggcc
aacgcccgtgcgcaaaccatgatgccgttgatccgcaacgtgatgttcgtggtcatcttc
atcatcgcggtcatcgtcgccctggccaacatgggcatgaacgtcaccccgctgctggcc
ggtgccggtgtgatcggcctggccatcggttttggcgcgcagtcgctggtggccgacctg
atcaccggcctgttcatcatcatcgaagattcgctggccatcgacgactacgtggatgtc
ggcggccacctgggcacagtggaagggttgaccattcgtaccgtgcgcctgcgcgacatc
gacggcattgtgcataccatcccgttcagcgaaatcaagagcatcaagaactactcgcgg
gagttcggctacgcgatcttccgcgtggcaatcccgcacagcatgaacatcgaccaggcg
atcacgctggttcgcgaagtggggcagaagctgcgcaatgacccgctgatgcgccgcaat
atctggtcgccgctggagctacagggggtggagagcttcgagtcagggtcggcgatcttg
cgggcgcggttcaagaccgcgccgatcaagcagtgggaggtgtcgcgggcgttcaacctg
gccttgaagcggcagctggatgaagccgggctggacctggcgacgccgcggttgtcggtg
caggtggtgacagccggtgggggtgggatgacagaggcccgctcgtag
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