KEGG   Pseudomonas putida ND6: YSA_03990
Entry
YSA_03990         CDS       T02170                                 
Name
(GenBank) PutA
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
ppi  Pseudomonas putida ND6
Pathway
ppi00250  Alanine, aspartate and glutamate metabolism
ppi00330  Arginine and proline metabolism
ppi01100  Metabolic pathways
ppi01110  Biosynthesis of secondary metabolites
Module
ppi_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:ppi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    YSA_03990
   00330 Arginine and proline metabolism
    YSA_03990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppi03000]
    YSA_03990
Enzymes [BR:ppi01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     YSA_03990
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     YSA_03990
Transcription factors [BR:ppi03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    YSA_03990
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PutA_1st PRODH RHH_1
Other DBs
NCBI-ProteinID: AFK68925
UniProt: I3UTV4
LinkDB
Position
2142171..2146124
AA seq 1317 aa
MATTTLGVKLDDPTRERLKAAAQSIDRTPHWLIKQAIFNYLEKLEGGATLTELNGHVSNL
ADDAGEVQADHSHQCFLEFAESILPQSVLRSAITAAYRRPEQEVVPMLLEQARLSAPLAE
ATNKLAAGIAEKLRNQKSAGGRAGIVQGLLQEFSLSSQEGVALMCLAEALLRIPDKGTRD
ALIRDKISTGNWQPHLGNSPSLFVNAATWGLLLTGKLVSTHNETGLTSSLTRIIGKSGEP
MIRKGVDMAMRLMGEQFVTGETIAEALANASRFEAKGFRYSYDMLGEAALTEHDAQKYLA
SYEQAIHSIGKASHGRGIYEGPGISIKLSALHPRYSRAQYERVMEELYPRLLSLTLLAKQ
YDIGLNIDAEEADRLELSLDLLERLCFEPSLAGWNGIGFVIQAYQKRCPYVIDYVIDLAK
RSRHRLMIRLVKGAYWDSEIKRAQVEGLEGYPVYTRKVYTDVSYVACARKLLAVPEAIYP
QFATHNAHTLSAIYHIAGQNYYPGQYEFQCLHGMGEPLYEQVVGKIADGKLNRPCRVYAP
VGTHETLLAYLVRRLLENGANTSFVNRIADHSISIQELVADPVASIERMGTQEGSIGLPH
PRIPLPRDLYGTERANSAGIDMANEHRLASLSCAMLATAHNDWKAAPLLACAASESAAAP
VLNPADHRDVVGHVQEATVADVDNAIQCALNAAPIWQATPPAERAAILERTADLMEAEIQ
PLMGLLIREAGKTFANAIAEVREAVDFLRYYAVQARNDFSNDAHRPLGPVVCISPWNFPL
AIFTGQVAAALAAGNPVLAKPAEQTPLIAAQAVRLLLEAGIPEGVLQLLPGRGETVGAGL
VGDERVKGVMFTGSTEVARLLQRNVAGRLDNQGRPIPLIAETGGQNAMIVDSSALTEQVV
IDVVSSAFDSAGQRCSALRVLCLQEDSADRVIEMLKGAMAESRLGCPDRLAVDIGPVIDA
EAKAGIEKHIQGMREKGRPVYQVAIADAAEIKRGTFVMPTLIELDSFNELKREIFGPVLH
VVRYNRRNLDQLIEQINNSGYGLTLGVHTRIDETIAKVVETANAGNMYVNRNIVGAVVGV
QPFGGEGLSGTGPKAGGPLYLYRLLSTRPADAIGRHFQQQDGEGKPDRTLHEQLVKPLHG
LKAWAENNQLADLAALCSQFASQSQSGIARLLPGPTGERNSYTILPREHVLCLADNETDL
LAQFAAVLAVGSSAVWVDGEPGKALRARLPRELQAKVKLVADWNKDEVAFDAVIHHGDSD
QLRGVCQQVAKRAGAIVGVHGLSSGDHQIALERLVIERAVSVNTAAAGGNASLMTIG
NT seq 3954 nt   +upstreamnt  +downstreamnt
atggcgactaccacccttggggtcaaactcgacgacccgacccgtgagcgactcaaagca
gctgcgcagtccattgaccgcacgccgcactggttgatcaagcaagcgatcttcaactat
ctggagaagctcgagggtggcgccaccctgaccgaactcaacggtcatgtcagcaacctg
gccgacgatgccggtgaagtccaggccgaccacagccaccagtgcttcctcgaatttgcc
gaaagcatcttgccgcagtcggtactgcgctcggcgatcaccgctgcctaccgccgaccg
gagcaggaagtggtgccgatgctgctggagcaggcgcgcctgagcgcgccactggccgaa
gccaccaacaagctggccgcgggcattgccgaaaagctgcgcaatcagaaaagcgccggc
ggccgtgccggtatcgtccagggcctgctgcaagaattctcgctgtcgtctcaggaaggc
gtggcgctgatgtgcctggccgaagccctgctgcgtatccccgacaaaggtacccgtgat
gcgctgatccgcgacaagatcagtaccggcaactggcagccgcacctgggcaacagcccg
tcactgttcgtcaacgccgccacctgggggctgctgctgaccggcaagctggtcagcacc
cataacgaaaccggcctcacctcctcgctcacccgcatcatcggcaagagcggcgaaccg
atgatccgcaagggcgtcgacatggccatgcgcctgatgggtgagcagttcgtcaccggc
gagaccattgccgaagccctggccaacgccagccgtttcgaggccaaaggcttccgttac
tcctacgacatgctcggcgaagccgcactgaccgagcacgacgcgcagaagtacctggcg
tcctacgagcaagccatccactcgatcggcaaggcctcgcatggccgtggcatctatgaa
ggcccaggtatctcgatcaagctgtcggcactgcacccgcgctacagccgcgcccagtac
gagcgcgtgatggaggagctgtacccgcgcctgctgtcgctgaccctgctggccaagcag
tacgacatcggccttaacatcgacgccgaagaagccgaccgcctggagctttcgctggac
ctgctcgaacgcctgtgcttcgagccatccctggctggctggaacggcatcggcttcgtt
atccaggcctaccagaagcgctgcccgtacgtgatcgactacgtcatcgatctggccaag
cgcagccgccaccgcctgatgatccgcctggtaaaaggcgcctactgggacagcgagatc
aagcgtgcccaggtcgaaggcctggaaggctacccggtctatacccgcaaggtgtacacc
gacgtgtcctacgtcgcctgcgcccgcaagctgctggccgtgccagaagccatctacccg
cagttcgccacccacaacgcccacaccctgtcggccatctaccacattgccgggcagaac
tattacccgggccagtacgagttccagtgcctgcacggcatgggcgagccgctgtacgag
caagtggtcggcaagattgccgatggcaagctgaaccgcccgtgccgcgtgtatgcaccg
gtcggcacccatgaaacgctgctggcctacctggtgcgccgcctgctggaaaacggcgcg
aacacctcgttcgtcaaccgcattgccgaccactcgatttccatccaggaactggtcgcc
gacccggtggccagcatcgagcgcatgggtacccaggaaggcagtatcggcctgccgcac
ccacgcattcccctgccgcgcgacctgtatggcaccgaacgggccaactcggccggtatc
gacatggccaacgaacaccgcctggcatcgctgtcctgcgccatgctggccaccgctcac
aatgactggaaggctgccccgctactggcctgcgccgccagcgagagcgcagccgcaccg
gtgctgaacccggctgaccaccgcgacgtcgtcggccatgtgcaggaggccaccgttgcc
gacgtggacaacgccatccagtgcgcactgaacgccgcaccgatctggcaggccaccccg
ccagccgagcgtgctgccattctggagcgcaccgccgacctgatggaggccgagatccag
ccgctgatgggcctgctcatccgcgaggccggcaagacgttcgccaacgccattgccgaa
gtgcgtgaagccgtggacttcctgcgctactacgcggtgcaggcacgtaacgacttcagc
aacgacgcccaccgcccactgggccctgtggtgtgcatcagcccatggaacttcccgctg
gcgatcttcaccggccaggtggccgcagccctggctgccggcaacccggtactggccaag
cctgccgagcaaaccccactgatcgccgcccaggccgtgcgcctgctgctggaagctggc
atcccagaaggcgtgctgcagctgctgcctggccgcggtgaaaccgtcggagccggcctg
gtcggggacgaacgcgtcaaaggcgtgatgttcaccggctccactgaagtggcccgcctg
ctgcagcgcaacgtcgctggccgtctggacaaccagggccgcccgatcccgctgatcgcc
gaaaccggcggccagaacgcgatgatcgtcgactcctcggcactgaccgaacaggtcgtg
atcgacgtggtgtcctcggccttcgacagtgccggccagcgttgctcggccctgcgcgta
ctgtgcctgcaggaagactccgccgaccgcgtaatcgaaatgctcaagggcgccatggct
gaaagccgcctgggctgcccggaccgcctggccgtggacatcggcccggtgatcgatgcc
gaagccaaggccggcatcgagaagcacatccagggcatgcgcgagaaaggccgcccggtc
taccaagtcgccattgccgatgctgcagagatcaagcgcggcaccttcgtcatgccaacc
ctgatcgagctggacagcttcaacgagctgaagcgcgaaatcttcggccccgtgctgcac
gtggtgcgctacaaccgccgcaatctggaccagctgatcgagcagatcaacaactctggc
tacggcctgaccctcggcgtgcacacccgtatcgacgagaccatcgccaaggtggtggaa
accgccaacgccggcaacatgtacgtcaaccgcaacattgtgggtgcagtggtgggcgtg
cagccgttcggtggtgaaggcctgtcgggtaccggcccgaaagccggcggcccgctgtac
ctctaccgcctgctgtcgacccgcccggccgacgccatcggccgccacttccagcagcag
gacggcgaaggcaagccggatcgcaccctgcacgaacagctggtcaaaccactgcacggc
ctgaaggcctgggccgagaacaaccagctggccgacctggccgcgctgtgcagccagttc
gccagccagtcgcagagcggcatcgcccgcctgctgcctggcccgaccggcgagcgcaac
agctacaccattctgccgcgtgagcacgtgctgtgcctggccgacaacgaaaccgacctg
ctggcgcagttcgccgcagtactggccgttggcagctcggcggtgtgggttgacggtgaa
ccgggcaaggccctgcgcgcccgcctgccgcgtgagctgcaggccaaggtgaagctggtc
gcggactggaacaaggatgaagtagcgttcgacgccgtgatccaccatggcgactcggac
cagctgcgcggcgtatgccagcaggtggccaagcgagccggggcgatcgttggggtgcac
gggctgtccagcggtgatcaccagattgcgctggagcgcctggtcatcgagcgcgcggtg
agcgtgaacactgcggcggcgggtggtaacgccagcctgatgaccattggctaa

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