Pseudomonas putida ND6: YSA_06005
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Entry
YSA_06005 CDS
T02170
Name
(GenBank) selenocysteine synthase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi00450
Selenocompound metabolism
ppi00970
Aminoacyl-tRNA biosynthesis
ppi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
YSA_06005
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
YSA_06005
Enzymes [BR:
ppi01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
YSA_06005
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SelA
Se-cys_synth_N
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Cas9_b_hairpin
Motif
Other DBs
NCBI-ProteinID:
AFK70016
UniProt:
I3UWZ5
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All DBs
Position
3248682..3250109
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AA seq
475 aa
AA seq
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MSNSLASDTPRLPSIDTLLRHPACLPLIDRHGRDAVLNTLRQLLDDLREPARHGELGSAE
LAPEILLGRSGERLALQQRSQVRRVFNLTGTVLHTNLGRALLPEEAIEAMQTAARYPLNL
EFDLATGKRGDRDDLIEGLIRELTGAEAVTVVNNNAAAVLLALNSLGARKEGIISRGELI
EIGGAFRIPDIMARAGVKLHEVGTTNRTHARDYEAAIGPRTGLLMRVHCSNYSIQGFTTQ
VPTVELARIAHQHQLPLLEDLGSGSLLDLTRWGLPAEPTVRQALADGADIVTFSGDKLLG
GPQAGIIVGHKDLITRIKKNPLKRALRVDKITLAALEAVLALYRNPDRLAERLPSLRLLT
RSQAEIQAQAERLAPELQARLGEQWAIRVEPALGMIGSGSQPVARLPSAALCLRPQVSKK
LRGRSLHVLERALRDLPVPVLGRIDDDALWLDLRQLDDEAQWLAQLPALQLGPVQ
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacagccttgccagcgacaccccacgcctgccgtccatcgataccctccttcgc
cacccggcttgcctccctctgatcgatcgccacggccgtgacgccgtgctgaataccctg
cgccagttgctcgacgacctgcgcgagcccgcccgtcatggcgaactcggcagcgccgaa
ctggctccggaaatcctccttggccgcagcggcgaacgcctcgccctccagcaacgcagc
caggttcgccgcgtgttcaatctcaccgggaccgtgctgcacaccaacctgggccgcgcc
ttgctaccggaagaagccatcgaggccatgcagaccgcggctcgttacccgctcaacctg
gaatttgacctggccaccggcaaacgtggcgaccgtgatgacctgatcgaaggcctgatt
cgcgagctgaccggcgccgaagccgtcactgtggtcaacaacaatgccgccgccgtgctg
ctagcgctcaacagcctgggcgcgcgcaaggagggcatcatctctcgcggtgaactgatc
gagatcggtggtgctttccgcattcccgacatcatggcccgtgccggcgtcaagctgcac
gaggttggcaccaccaaccgtactcacgcccgcgactacgaggcggccatcggcccgcgc
actggcctgctgatgcgggtgcattgcagcaattacagcatccagggcttcaccacccag
gtgcctactgtcgagctggcacgtatcgcccaccaacatcaactgccactgcttgaagac
ctgggcagcggcagcctgctcgaccttacccgctggggcctgcccgccgaacccacggta
cgccaggccctggccgatggtgccgatatcgtcaccttcagtggcgacaaactgctgggg
gggccgcaagccgggatcatcgtcggccacaaggacttgatcaccaggatcaagaaaaat
ccgctcaagcgtgcgttgcgcgtcgacaagatcaccctcgctgcactcgaagcggtgctg
gcgctgtaccgtaaccccgatcgcctggccgagcgcctgcccagcctgcgcttgctgact
cgcagccaggccgagattcaggcccaggccgagcgcctggcgcctgagctccaggcgcgc
ctcggcgagcaatgggccatccgtgtagagcccgcgttgggcatgatcggcagtggcagc
cagccggttgcacgcttgcccagtgccgcgctgtgcctgcgcccgcaagtgtcgaagaag
ttgcgcgggcgcagcctgcatgtgctggagcgagccctgcgtgacctaccggtgccggtg
ctgggccgcattgatgacgatgccctgtggctggacctgcgccagctggatgacgaagcc
cagtggctggcccagttgccagccctgcagctggggccggtgcagtga
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