Pseudomonas putida ND6: YSA_08133
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Entry
YSA_08133 CDS
T02170
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi00470
D-Amino acid metabolism
ppi00550
Peptidoglycan biosynthesis
ppi01100
Metabolic pathways
ppi01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
YSA_08133
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
YSA_08133
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
YSA_08133
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppi01011
]
YSA_08133
Enzymes [BR:
ppi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
YSA_08133
Peptidoglycan biosynthesis and degradation proteins [BR:
ppi01011
]
Precursor biosynthesis
Amino acid ligase
YSA_08133
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_3
ATP-grasp_4
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
AFK71168
UniProt:
I3V097
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All DBs
Position
4388663..4389460
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AA seq
265 aa
AA seq
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MEIGIDLLFPALHGRWGEDGTIQGLAAMCGLPCVGSGVLGSAMAMDKDVTKRMVQSAGLV
VGPWLALNSMRPWEELVECLGSSTLFVKPATSGSSIGVSRVSNALEYAAAFAIAAREDTK
VLVEAAVCGREIECGVLELEEGLMASVVGEIIKKEGHAYYDYQAKYDSNSVTGLRVPSLL
PPDIVARIQALSVQAFRCLELKGYARVDFFLTEEGEIILNEINTLPGFTSASMYPKMFEC
SGYPPPKLVGALVEYGLSSASKERL
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
gtggagattgggatcgatttgcttttcccggcactgcatggtcggtggggggaggatgga
acaattcaaggattggcagcgatgtgcggtttgccgtgtgtgggctccggggtgctaggt
tcggcaatggccatggataaagatgtcacaaagagaatggtccagtctgccgggcttgtt
gtggggccttggctggccttgaactccatgcgtccttgggaggaactggttgagtgcctg
ggtagcagcacgctcttcgtaaagcccgctacttcgggctcatcgattggtgtgtctagg
gtctccaacgccttggaatatgctgcggcatttgctattgcagcacgagaagacacaaag
gtgctggtggaggctgctgtctgtggaagagagatagagtgtggtgtgctcgagcttgag
gagggtttgatggcctcggtggtgggtgaaataatcaaaaaggaagggcacgcctattac
gattatcaggcgaaatacgattccaacagtgtgacaggtcttcgtgtgccaagcttgttg
ccacctgacattgtcgcgcgcatccaggctttatctgtccaggcgtttagatgccttgaa
ttgaaggggtacgccagggtggattttttcttgacagaagagggtgagattattctcaat
gagatcaataccttacccggatttacgagtgccagtatgtacccgaagatgtttgagtgc
tccggttaccctccgccgaagttggtaggagcgctagtcgaatatgggctctcatcagca
tctaaagaacgtttatga
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