Pseudomonas putida ND6: YSA_09436
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Entry
YSA_09436 CDS
T02170
Name
(GenBank) alanine racemase
KO
K25317
amino-acid racemase [EC:
5.1.1.10
]
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi00260
Glycine, serine and threonine metabolism
ppi00270
Cysteine and methionine metabolism
ppi00310
Lysine degradation
ppi00470
D-Amino acid metabolism
ppi01100
Metabolic pathways
ppi01120
Microbial metabolism in diverse environments
Module
ppi_M00960
Lysine degradation, bacteria, L-lysine => D-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
YSA_09436
00270 Cysteine and methionine metabolism
YSA_09436
00310 Lysine degradation
YSA_09436
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
YSA_09436
Enzymes [BR:
ppi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.10 amino-acid racemase
YSA_09436
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Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
DUF5604
Motif
Other DBs
NCBI-ProteinID:
AFK71878
UniProt:
I3V2A7
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All DBs
Position
5065163..5066305
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AA seq
380 aa
AA seq
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MDNGTNALTVQNSNAWVEVSASALQHNIRTLQAELAGKSKLCAVLKADAYGHGIGLVMPS
IIAQGVPCVAVASNEEARVVRASGFTGQLVRVRLASLSELEDGLQYDMEELVGSAEFARQ
ADAIAARHGKTLRIHMALNSSGMSRNGVEMATWSGRGEALQITDQKHLKLVALMTHFAVE
DKDDVRKGLAAFNEQTDWLIKHAKLDRSKLTLHAANSFATLEVPEARLDMVRTGGALFGD
TVPARTEYKRAMQFKSHVAAVHSYPAGNTVGYDRTFTLARDSRLANITVGYSDGYRRVFT
NKGHVLINGHRVPVVGKVSMNTLMVDVTDFPDVKGGNEVVLFGKQAGGEITQAEMEEING
ALLADLYTVWGSSNPKILVD
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggacaacggtaccaatgccctgaccgtgcaaaacagcaatgcctgggtcgaagtcagc
gccagcgccctgcagcacaacatccgcacgctgcaggccgagctggccggcaagtccaag
ctgtgcgccgtgctcaaggccgatgcctatggccacggtatcggcctggtaatgccatcg
atcatcgcccagggcgtgccctgcgtggcggtggccagcaacgaggaggcccgcgtggtc
cgcgccagtggcttcaccgggcaactggtgcgggtacgcctggccagcctaagcgagctg
gaagatggcttgcagtacgacatggaagagctggtgggcagcgcggaatttgcccgccag
gccgatgccatcgccgcgcgccatggcaagaccttgcgcattcacatggcgctcaactcc
agcggcatgagccgcaacggggtggagatggccacctggtccggccgtggcgaagcgctg
cagatcaccgaccagaagcacctcaagctggtcgcgctgatgacccacttcgccgtggaa
gacaaggacgatgtccgcaagggcctggcggccttcaacgagcagaccgactggttgatc
aagcacgcgaagctcgaccgcagcaagctcaccctgcacgccgccaactcgttcgctacg
ctggaggtgccggaagcgcgcctggacatggtacgaacggggggcgcgctgttcggcgac
accgtgccggcgcgcaccgagtacaagcgtgcgatgcagttcaaatcgcacgtggctgcg
gtgcacagctatccggctggcaacaccgtgggctatgaccgcaccttcaccctggcccgt
gattcgcgcctggccaacattacggtcgggtactccgacggctaccgccgggtattcacc
aacaagggccatgtgctgatcaacggccaccgtgtgccggtggtgggcaaggtgtcgatg
aacacgctgatggtcgatgtcaccgacttccctgatgtgaaggggggcaacgaagtggtg
ctgttcggcaagcaggccgggggcgaaatcacccaggccgagatggaagaaatcaacggc
gcgttgctcgccgatctgtacaccgtatggggcagttccaacccgaagatcctcgtcgac
tga
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