Pseudoalteromonas piscicida: B1L02_06040
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Entry
B1L02_06040 CDS
T04942
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
ppis
Pseudoalteromonas piscicida
Pathway
ppis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B1L02_06040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppis03400
]
B1L02_06040
DNA repair and recombination proteins [BR:
ppis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B1L02_06040
RecFOR pathway proteins
B1L02_06040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
RuvA_C
HHH_5
HHH
RecR_HhH
IMS_HHH
Transposase_20
HHH_3
UBA
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
ASD66628
UniProt:
A0A1Z3NGP5
LinkDB
All DBs
Position
1:1266473..1267090
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AA seq
205 aa
AA seq
DB search
MIGKLSGTLLEKQPPEILIDVAGVGYEVQMPMTCFYELPSVGEPVSVFTHFVVREDAQLL
FGFNTKIARALFRTLIKANGVGPKLGLAILSGMSAEQFVSCVNHGDATTLVKIPGVGKKT
AERLVLEMKDKLKDFGNDLLTPFSDAAVLAPQEHPTVSDTPADEAIAALMALGYKQVQAQ
KAVKAVNREGMTTESIIKDALKSMM
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgataggaaaattaagcggaacactgttagaaaagcagccaccagagatattaattgat
gttgcaggtgtaggctacgaagtacaaatgccaatgacctgtttttatgaattaccgagc
gtaggtgagccggtttcagtatttactcactttgtggtgcgtgaagatgcgcagttactg
ttcggttttaataccaagatcgcacgtgcattgtttcgaacgttaattaaagcgaacgga
gtcggtccaaagctcggacttgcaattttgtcgggcatgtcagcggagcaatttgttagc
tgcgtgaatcatggtgatgcgactactttggttaagatcccgggagttggtaagaagact
gctgaacgcctagtgcttgaaatgaaagataagctaaaagactttggcaatgacttactc
acaccgtttagcgatgctgctgtacttgcgccgcaagagcatccgacagtaagtgatacc
cccgcagatgaagcaattgcagccttaatggcattagggtataaacaagttcaagcacaa
aaagcggtaaaagccgttaacagagaaggcatgacgaccgagagtatcattaaagatgct
cttaaatcgatgatgtaa
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