Pseudoalteromonas piscicida: B1L02_06045
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Entry
B1L02_06045 CDS
T04942
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ppis
Pseudoalteromonas piscicida
Pathway
ppis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B1L02_06045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppis03400
]
B1L02_06045
Enzymes [BR:
ppis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B1L02_06045
DNA repair and recombination proteins [BR:
ppis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B1L02_06045
RecFOR pathway proteins
B1L02_06045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_22
AAA_16
AAA_3
AAA_14
nSTAND3
NTPase_1
AAA_2
TIP49
RNA_helicase
MCM
Rad17
AAA_18
Sigma54_activ_2
AAA_17
AAA_24
Bac_DnaA
NB-ARC
AAA_19
ABC_tran
AAA_28
TsaE
Resolvase
ATP-synt_ab
bpMoxR
AAA_PrkA
ATPase_2
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ASD66629
UniProt:
A0A3B6Y0Q4
LinkDB
All DBs
Position
1:1267093..1268097
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLIEPEIQGNEDLVDRAIRPKLLNDYTGQPHVKKQMEIFIAAARSRQEALDHLLI
FGPPGLGKTTLANIVANELEVNIKTTSGPVLEKAGDLAALLTNLEEGDVLFIDEIHRLSP
QVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGSLTSPLRDRFGIVQR
LEFYSVADLSSIVTRSAYHLNLEISESGATEVARRARGTPRIANRLLRRVRDFAEVKGDG
SITEEIAHLALDMVDVDKCGFDYMDRKYLLAIIEKFTGGPVGLDNLAAAIGEEKETIEDV
IEPFLIQQGFIQRTPRGRIVSDKAYMHFELNKPE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcagatagattaattgaacccgagatccaaggtaatgaagatttagttgat
agggcaattagacctaaattactaaatgattatactggtcagccgcatgttaaaaagcaa
atggaaatttttatagcggcagcgcgttcaagacaggaagccttagatcacttactgata
tttggtccgccgggtttaggtaaaaccacgcttgcaaatattgttgcaaacgagctcgag
gttaatattaaaacgacctcggggcctgtacttgaaaaagcaggagatttagccgcattg
ctcactaaccttgaagaaggggatgtgttatttattgatgaaatccatcgtttaagtcct
caggtggaagaaattctctatcccgctatggaagactaccaattggacatcatgattggt
gaaggtccagcagcacgctcgattaaactggatttaccaccttttactttagttggtgca
acgacacgtgccggctcgttaacctcaccattgagagaccgctttggtattgtgcagcgc
ttggagttttactcggttgcggatttgtcttcgatagtgactcgctcagcgtatcattta
aatctagagatcagcgagtcgggcgcaactgaagtggcgcgtcgagcgcgcggtacgcca
cgaatagcaaaccgtttactacgcagggtaagagactttgctgaagtgaagggggatggc
tctatcactgaagagattgcacatctagcgttggatatggtcgatgttgataaatgtggc
ttcgattatatggaccgcaaatatctgctggcaatcatagaaaagtttaccggtggccca
gttggtctagataaccttgctgcggcaatcggagaagaaaaagaaaccatcgaagatgtg
atagaaccatttttgatccaacaaggctttattcaacgcacgccaaggggacgtattgtc
tctgacaaagcctacatgcattttgagctaaacaagcctgaataa
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