Pseudomonas plecoglossicida: RK21_00162
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Entry
RK21_00162 CDS
T03646
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00300
Lysine biosynthesis
ppj00550
Peptidoglycan biosynthesis
ppj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RK21_00162
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RK21_00162
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppj01011
]
RK21_00162
Enzymes [BR:
ppj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
RK21_00162
Peptidoglycan biosynthesis and degradation proteins [BR:
ppj01011
]
Precursor biosynthesis
Amino acid ligase
RK21_00162
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CBP_BcsQ
Motif
Other DBs
NCBI-ProteinID:
AJG11670
UniProt:
A0A0B5K5G2
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All DBs
Position
165200..166690
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AA seq
496 aa
AA seq
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MMTMPLSKLFAHASRDPLIRELTLDSRNVRPGDLFLAVPGAKVDGREHIADALARGAAAV
AYEEQGASVLPITDVPLIPVKGLIAQLSDIAGRFYGEPSRQLNLVGVTGTNGKTSVTQLV
AQALDLLGQRCGLIGTLGTGFYGELQSGRLTTPDPIAVQSTLNDLKKGGAKAVAMEVSSH
ALEQGRVAALEFDIAVMTNLSRDHLDYHGSMEAYEAAKAKLFAWPSLRCQVVNLDDDFGR
RLAADFARRPSVDHIETRLLSYSLENPEASLYCREAVFNDDGVCATLVTAQGERTLRSQL
LGRFNLSNMLAAVATLLALDYALDEILEVTRKLQGPIGRMQRLGGGDKPLVVVDYAHTPD
ALEKVLEALRPHAHGKLLCLFGCGGDRDRGKRPLMAEVAERLADRVLVTDDNPRTEDPLR
IFDDIRPGFTKPVEVEFVAGRGEAIAHLIATAAADDVIVLAGKGHEDYQEINGERHDFSD
LTEAEKALAAWEAPHA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaatgccattgagcaagcttttcgctcacgccagccgtgacccgttgatccgt
gaactgacgctggacagccgcaatgtgcgcccgggtgatctgttcctggctgttccgggt
gccaaggtcgatggccgcgagcatatcgccgatgccctggcgcgtggcgctgccgccgta
gcctatgaagagcagggcgcgagcgtcctgccaatcaccgatgtgccgctcatcccggtc
aagggcctgatcgcccagctttcggatatcgcaggtcgcttctatggcgaaccaagccgc
cagctgaatctggtgggcgttaccggtaccaacggcaagaccagcgtcacccagctggtg
gctcaggcgctggatttgcttggccagcgttgtggcctgatcggcaccttgggtaccggc
ttctatggtgagctgcagagtggccgcctgaccacgcccgacccgatcgccgtacagtcg
accctcaatgacctcaagaaaggtggcgccaaagccgtggccatggaggtttcctcccac
gcactggagcagggccgggtcgccgctctggaattcgacattgcggtcatgaccaacctg
tcccgcgaccacctggactaccacggcagcatggaggcctatgaggccgccaaggccaag
ctgttcgcctggccgagcctgcgttgccaggtggtcaacctggatgacgatttcggccgt
cgcctggccgccgattttgcccgccgcccgagtgtcgaccatatcgaaacccggttgctc
agctacagcctggagaacccggaggcctcgctgtactgccgtgaagccgtgttcaatgac
gatggcgtgtgcgccaccctggtcaccgcccagggcgaacgtaccctgcgcagccagttg
ctgggccgcttcaacctgagcaacatgctcgccgccgtggcgactctgttggcgctggac
tatgcgctggacgaaatcctcgaggtcacccggaaactgcaggggcctatcggccgtatg
cagcgcctgggtgggggcgacaagccgttggtggtggtcgactatgcgcacaccccggac
gccctggagaaagtgctcgaagccctgcgcccgcatgcgcacggcaagctgctgtgcctc
ttcggctgcggcggcgaccgagaccgcggcaagcgcccgctgatggctgaagtggccgag
cgcctggccgaccgcgtgctggtaacagacgacaacccgcgtactgaagacccgctgcgc
atctttgacgacatccgcccgggtttcaccaagcctgtcgaagtcgagttcgttgccggt
cgtggcgaagccatcgcgcacctgatcgccaccgccgctgccgacgatgtgatcgtgctg
gccggcaaggggcacgaggattaccaggagatcaatggcgagcgccatgatttctccgat
ttgaccgaggccgaaaaggcacttgcagcctgggaggctccacatgcttaa
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