Pseudomonas plecoglossicida: RK21_00169
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Entry
RK21_00169 CDS
T03646
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00470
D-Amino acid metabolism
ppj00550
Peptidoglycan biosynthesis
ppj01100
Metabolic pathways
ppj01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RK21_00169
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RK21_00169
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RK21_00169
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppj01011
]
RK21_00169
Enzymes [BR:
ppj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RK21_00169
Peptidoglycan biosynthesis and degradation proteins [BR:
ppj01011
]
Precursor biosynthesis
Amino acid ligase
RK21_00169
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
RimK
ATPgrasp_YheCD
ATP-grasp_5
GARS_A
TTL
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
AJG11677
UniProt:
A0A099N645
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All DBs
Position
174203..175159
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AA seq
318 aa
AA seq
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MTSAYDKLHSTLDVKAFGRVAVLYGGKSAEREVSLKSGAAVIDALTTAGVDVVAIDVGDD
LLDRLQSEKIDRAFIILHGRGGEDGSMQGLLECLGIPYTGSGILASALAMDKLRTKQVWQ
SLGIPTPRHAVLASESDCLQASTELGFPLIVKPAHEGSSIGMAKVNSAQELVAAWQDAAK
YDSQVLVEQWIHGPEFTVAVLRGQVLPPIALGTPHVFYDYDAKYIANDTQYRIPCGLDSV
KEQELIDLTARACDAIGIEGWGRLDVMQDEQGRFWLLEVNTAPGMTDHSLVPMAARAAGL
DFQQLVLAILAESVATRG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcgcctacgacaaactgcactcgaccctggacgtcaaggcgttcggccgcgtc
gcggtgctgtacggcggcaagagcgccgagcgcgaagtgtcgctcaagtccggcgccgca
gtgatcgacgcgctgaccaccgccggtgtcgacgtggtcgccatcgacgtgggggacgac
ctgctcgaccgcctgcaaagcgagaagatcgaccgcgccttcatcattctccacggtcgt
ggcggtgaagacggcagcatgcaaggcctgctcgagtgcctgggcattccctataccggc
agtggcatccttgcttcggcactggccatggacaagctgcgcaccaagcaggtgtggcag
agcctgggcattccgactccgcgccacgcagtgctggcgagcgaaagcgattgtttgcag
gccagtacggaactgggcttcccgcttatcgtcaaacccgcccatgaaggttccagcatc
ggcatggccaaggtgaacagcgcccaggaactggtcgccgcctggcaggacgcagctaaa
tacgattcccaggtactggtggagcagtggatccacgggccggagttcaccgtcgcggta
ttgcgcggccaggtgctgccgccgatcgccctgggtacgccgcacgtgttctacgactac
gacgccaagtacatcgccaacgatacccagtaccgcattccgtgcggcctggacagcgtc
aaggaacaggaactgatcgacctgaccgcgcgtgcctgcgatgccatcggcatcgaaggc
tgggggcggctggacgtgatgcaggacgagcagggccggttctggctgctcgaagtcaac
accgcacccggcatgaccgaccatagcctggtgcccatggcggcccgcgcggccggcctg
gacttccagcaactggtgctggcaatcctggccgagagcgtggcgacgcgaggttaa
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