Pseudomonas plecoglossicida: RK21_00291
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Entry
RK21_00291 CDS
T03646
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RK21_00291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppj03400
]
RK21_00291
Enzymes [BR:
ppj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RK21_00291
DNA repair and recombination proteins [BR:
ppj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RK21_00291
Prokaryotic type
RK21_00291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AJG11799
UniProt:
A0A099N623
LinkDB
All DBs
Position
304163..304855
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AA seq
230 aa
AA seq
DB search
MTDDDRIKLEPSWKAALRAEFDQPYMHQLREFLRSEYAAGKEIYPPGPLIFNALNSTPLD
QVKVVILGQDPYHGPGQAHGLCFSVQPGVATPPSLVNIYKELQRDLNIPIASHGYLQSWA
EQGVLLLNTTMTVERANAASHAKKGWEFFTDRVIQVVSEQCPNVVFLLWGSHAQSKQKLI
DGTKHLVLKSVHPSPLSAYRGFLGCGHFSRANSFLEQRGLAPINWALPPL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgacgatcgcatcaaactcgaacccagctggaaggccgccttgcgcgcggaa
ttcgaccagccctacatgcatcagttgcgcgagttcctgcgcagcgagtacgccgccggc
aaagagatctacccgccagggccgttgatcttcaacgcgctcaactcgacgccgctggac
caggtgaaggtggtcatccttggccaggacccttaccacgggccgggccaggcgcatggc
ctgtgcttctcggtgcagccgggcgtggccacgccaccttcgctggtcaacatctacaag
gagctgcagcgcgacctgaacatcccgattgccagtcatggctacctgcagagctgggcc
gagcagggggtgctgttgctcaacacgaccatgaccgtggagcgcgccaatgccgcgtcg
catgccaagaagggctgggagttctttaccgaccgggtcatccaggtggttagcgagcag
tgcccgaacgtggtgttcctgctgtggggctcgcatgcgcaaagcaagcagaagctgata
gacgggaccaagcacctggtgctgaaatcggtgcatccatcaccattgtcggcttaccgt
gggttcctggggtgcgggcatttcagccgggccaacagtttcctcgagcagcgcgggctg
gcgccgatcaactgggcattgccacccttgtaa
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