Pseudomonas plecoglossicida: RK21_03051
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Entry
RK21_03051 CDS
T03646
Name
(GenBank) LysR family transcriptional regulator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppj03000
]
RK21_03051
Transcription factors [BR:
ppj03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RK21_03051
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_5
HTH_24
HTH_20
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AJG14559
UniProt:
A0A0B5K7F4
LinkDB
All DBs
Position
complement(3200149..3201069)
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AA seq
306 aa
AA seq
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MSERIQALHALRAFEVASRYGSFTRAAEELALTQGAVSHHIKTLEAMFGCDLFERRGPKL
ALTEHGRLLAQELKVGFKIIENACALLRQDRYGLRLKAPSTLTVRWLLRALDAFKKTEDN
CSVQLSSVWMDIDSVDFYSEPYDCAILLANGRFPADIESFKLFDEWLIPVCHPDYMAQAQ
PDLADLAQCEFLHPSPDRRDWRRWLARMDALDISIDHGQVFDTLDQGISAAQQGLGISVV
DLVLASADLLAGRLVTPFKHAVATGDGYYMTWLKASPKARQMHKLREFLLGQVPPLPCKD
INYLYG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaacggattcaggctttgcacgcgctgcgtgccttcgaggtggcctctcgctat
ggctcatttacccgtgcagcggaagagctggccctgacccagggcgccgtcagccaccac
atcaagaccctcgaagccatgttcggctgcgacctgttcgaacgccgcgggccgaagctg
gccctgaccgagcacggccgcctgctggcgcaggaactcaaggttggcttcaagatcatc
gaaaatgcctgcgccctgctgcgtcaggaccgctacggcctgcgcctgaaggcgccgtcc
acgctcaccgtgcgctggctgctgcgggcgctggatgcgttcaagaagaccgaggacaac
tgcagcgtgcagctgtccagcgtgtggatggacatcgacagcgtggacttctattccgag
ccctacgactgtgcgatcctcctggccaacgggcgttttcccgccgatatcgagagtttc
aagctgttcgatgaatggctgatcccggtgtgccacccggattacatggcccaggcacaa
ccggaccttgccgacctggcccagtgcgaattcctgcacccgtcccctgaccgacgagac
tggcggcgctggctggctcgcatggacgcgctggacatcagcatcgatcacgggcaagtg
ttcgataccctcgaccagggcatctcggccgcacagcaaggcctgggtatatcggtggtc
gacctggtgctggccagcgccgacctgttggccgggcgcctggtcacgccgttcaagcac
gcggtggccaccggcgacggctattacatgacctggctcaaggccagccccaaggcgcgg
cagatgcacaagctgcgcgagttcctgcttggccaggtgccaccgctgccctgcaaggac
atcaattacctgtacggttga
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