Pseudomonas plecoglossicida: RK21_03242
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Entry
RK21_03242 CDS
T03646
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00630
Glyoxylate and dicarboxylate metabolism
ppj00680
Methane metabolism
ppj01100
Metabolic pathways
ppj01120
Microbial metabolism in diverse environments
ppj01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RK21_03242
09102 Energy metabolism
00680 Methane metabolism
RK21_03242
Enzymes [BR:
ppj01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
RK21_03242
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_10
Fer4_21
Fer4_9
Fer4_18
Fer4_2
Fer4_16
Fer4_8
Fer4_6
Fer4_4
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
AJG14750
UniProt:
A0A099MZ65
LinkDB
All DBs
Position
complement(3397149..3400031)
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AA seq
960 aa
AA seq
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MINFFDPASDKSSDLGTPARDSEVQVSLSIDGRAITVPAGTSVMRAAAMLGTSIPKLCAT
DSLEAFGSCRMCMVEIEGMRGYPASCTTPVSEGMVVHTETPRLAGLRRNVMELYISDHPL
DCLTCSANGNCELQTVAGQVGLREVRYGYDGANHLAEKKDVSNPYFDYEPSKCIVCSRCV
RACEDIQGTFALTITGRGFESRVAAAGGENFLASECVSCGACVQACPTATLTEKSLVQLG
QPERAVITTCAYCGVGCSFRAEMKGDQLVRMVPDKNGGANHGHACVKGRFAWGYATHPDR
ITKPMIRKRLEDPWQEVSWDEAVTYAASEFRRIQLKYGRDSIGGITSSRCTNEEAYLVQK
LVRTAFGNNNVDTCARVCHSPTGYGLKQTLGESAGTQSFDSVMQADVVLVIGANPTDAHP
VFGSQLKRRLRQGARLIVIDPRRIDLVDSPHARAELHLQLRPGTNVAMLNALAHVIVTEG
LLAQRFIDARCETEDFARWRDFVSLAENAPEVLGPVCGVPAEQIRAAARLYATGGNAAIY
YGLGVTEHSQGSTAVMGIANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGSFPHELPGY
RHISNEVVRAEFEQAWGVTLQPDPGLRIPNMFEAALDGSFKALYCQGEDIAQSDPNTQHV
TAALLAMECVVVQDIFLNETAKFAHVFLPGSSFLEKDGTFTNAERRISRVRKVMEPLAGK
ADWEATIALANALGYPMSYRHPSEIMDEIARLTPTFRRVSYAEIDRHGSLQWPCNDAAPD
GTPTMHIDQFVRGKGRFMLTGYVPTEEKVNNRYPLLLTTGRILSQYNVGAQTRRTGNVAW
HDADRLEIHPTDAESRGIQDGDWVGIGSRAGQTVLRAKVSTRVAPGVVYTTFHFPESGAN
VITTDNSDWATNCPEYKVTAVEVVKVFQPSQWQKRYQDFSDEQRRLLKERRIAEKTEVRR
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaatttcttcgaccccgcttctgataaaagcagcgacctcggcaccccggcccgt
gacagcgaggtacaggtcagcctgagcatcgatggccgtgccatcactgtgcccgccggt
acgtcggtgatgcgtgccgcggccatgctcggcaccagcatccccaaactgtgcgccacc
gacagcctcgaagccttcggctcgtgccgcatgtgcatggtggaaatcgaaggcatgcgc
ggctacccggcgtcctgcaccaccccggtcagcgaaggcatggtagtgcacaccgaaacc
ccgcgcctggccggcctgcgccgcaacgtgatggagctgtacatctccgaccacccgctg
gactgcctgacctgttcggccaacggtaactgcgagctgcagaccgtggccggccaggtg
ggcctgcgcgaggtgcgctacggctatgacggcgccaaccaccttgccgaaaaaaaggac
gtatccaacccgtacttcgactacgagcctagcaagtgcatcgtctgcagccgctgtgtg
cgtgcctgcgaggacatccagggcaccttcgccctgaccatcaccgggcgcggcttcgaa
tcgcgagtggcggcggcgggtggtgagaacttcctcgcctccgagtgcgtgtcttgcggc
gcctgcgtgcaggcctgcccgaccgcgaccctgaccgaaaagagcctggtacagctgggc
cagcccgagcgtgcggtcatcaccacctgcgcctattgcggcgtcggctgctcgttccgc
gccgaaatgaagggcgaccagctggtgcgcatggtcccggacaagaacggcggcgccaac
cacggccacgcctgcgtcaagggccgcttcgcctggggttacgccacccacccggaccgc
atcaccaagccaatgatccgcaagcgcctggaagacccatggcaggaagtcagctgggac
gaggcggtgacctacgccgccagcgagttccgccgtatccagctgaagtacggtcgcgat
tccatcggcggcatcacctccagccgctgcaccaacgaagaagcctacctggtgcagaaa
ctggtgcgcacggcgttcggcaacaacaacgtcgacacctgcgcgcgggtatgccattcg
cccaccggctatggcctgaagcagaccctgggtgagtcggccggtacacaaagcttcgac
tcggtgatgcaggccgacgtggtgctggtgatcggcgccaaccccaccgacgcccacccg
gtattcggctcgcagctcaagcgccgcctgcgccagggcgcgcggctgatcgtgatcgac
cctcggcgcatcgacctggtcgactcgccgcacgcccgcgccgagctgcacctgcaactg
cgccccggtaccaacgtggccatgctcaacgccctggcccacgtgatcgtcaccgaaggc
ctgctggcccagcgcttcatcgatgcccgctgtgaaaccgaggattttgcccgctggcgc
gacttcgtcagcctggcggaaaacgcccccgaagtgcttggcccggtctgcggcgtgcct
gccgagcagatccgcgccgccgcccggctgtacgccaccggcggcaacgcggcgatctac
tacggcctgggcgtgaccgagcacagccagggcagcaccgcggtgatgggcatcgccaac
ctggccatggccaccggcaacatcggccgtgaaggggtaggggtgaacccgctgcgcggg
cagaacaacgtgcaaggctcgtgcgacatgggctcgttcccccacgaactgcccggctac
aggcacatttccaacgaagttgtgcgcgccgagttcgagcaggcctggggcgtgacgctg
cagcctgacccgggcctgcgcatccccaacatgttcgaggctgcgctggacggcagtttc
aaggccctttactgccagggcgaggacattgcccagagcgaccccaacacccagcacgtc
accgcggccctgctggccatggagtgcgtggtggtgcaggacatcttcctcaacgaaaca
gccaagttcgcccatgtgttcctgccgggcagctcgttcctggagaaggacggtaccttc
accaatgccgagcggcgtatttcgcgggtgcgcaaggtcatggagccgttggccgggaag
gccgactgggaggcgaccatagccctggccaatgccttgggctacccgatgagctaccgt
cacccgtccgagatcatggacgagatcgcccgccttacgcctaccttccgccgcgtcagc
tacgccgagatcgaccgccacggcagcctgcagtggccgtgcaacgacgcagcgccggat
ggcacgccgaccatgcacatcgaccagttcgtacgtggcaaggggcgcttcatgctcacc
ggctacgtgcccaccgaggagaaggtcaacaaccgctacccgctgctgctgaccaccggg
cgcattctcagccagtacaacgtcggcgcccagacccggcgtaccggtaacgttgcctgg
catgacgccgaccgcctggaaatccacccgaccgacgccgaaagccgtggcatccaggat
ggcgactgggtcggcatcggcagccgcgccgggcagacggtgctgcgcgccaaggtcagc
acgcgggtggcgccgggtgtggtgtacaccaccttccacttcccagagtcgggggccaac
gtgattaccaccgacaattccgactgggccaccaactgccctgagtacaaggtgacggcg
gtggaggtggtgaaagtgttccagccgtcgcagtggcagaaacgctaccaggacttcagt
gacgagcagcggcggttgttgaaggagcgtcgtattgccgagaaaaccgaggtacgccga
tga
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