Pseudomonas plecoglossicida: RK21_04605
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Entry
RK21_04605 CDS
T03646
Name
(GenBank) spermidine/putrescine ABC transporter ATPase
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RK21_04605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppj02000
]
RK21_04605
Transporters [BR:
ppj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RK21_04605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
AAA_22
nSTAND3
AAA_25
Rad17
AAA_28
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AJG16113
UniProt:
A0A099MUJ4
LinkDB
All DBs
Position
complement(4809509..4810633)
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AA seq
374 aa
AA seq
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MSEAKSNAATSETLVSFRGVQKSYDGESLIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMM
LAGFETPTAGEIQLAGRSINNVPPHKRDIGMVFQNYALFPHMTVAENLAFPLTVRNLSKT
DISERVKRVLNMVQLDAFAKRYPGQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQL
REHMQMEIKHIHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIADPRTLYEEPCNT
FVANFIGENNRINGTLLASDGKRCQVQLPRGERVEALAVNVGQAGEPVTLSIRPERVRLN
GHSESCVNRFSGRVAEFIYLGDHVRVRLEVCGKGDFFVKQPIAELDPALAVGDVVPLGWE
VEHARALDPIAEAH
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcgaagtcgaacgctgcaaccagcgaaacgctggtcagcttccgtggtgtg
cagaagagctacgacggcgagtcgctgatcgtcaaagacctcaacctggatattcgcaag
ggcgagttcctcaccctgcttggcccgtccggctcgggcaagaccaccagcctgatgatg
ctggccggcttcgaaacccccaccgcaggtgaaatccagctggccgggcgttcgatcaac
aacgtgccgccgcacaagcgcgacatcggcatggtgttccagaactacgcgctgttcccg
cacatgaccgtggccgagaacctggcgttcccgctgaccgtgcgcaacctgagcaagacc
gacatcagcgagcgggtaaagcgggtgctgaacatggtccagctcgatgccttcgccaag
cgttaccccggccagctgtccggcggccagcagcagcgtgtggccctggcccgggcactg
gtgttcgagccgcagctggtgctgatggacgaaccgctgggcgcgctggacaagcagctg
cgcgagcacatgcagatggagatcaagcatatccaccagcgccttggcgtgaccgtggtg
tatgtgacccacgaccagggcgaggcgctgaccatgtccgaccgggtggccgtgttccat
cagggcgaaatccagcagattgccgacccgcgcacgctgtacgaagaaccctgcaacacc
ttcgtcgccaacttcatcggcgagaacaaccgcatcaacggcaccttgctggccagtgat
ggcaagcgctgccaggtgcagttgccgcgtggcgagcgggtcgaggcgctggcggtgaat
gtcggccaggccggcgagccggtgaccctgtcgatccgcccagagcgcgtgcgcctgaac
ggccacagcgagagctgcgtgaaccgcttctcgggccgggtggcggaattcatttacctg
ggcgaccacgtgcgggtgcgcctggaagtttgcggcaagggcgatttcttcgtgaaacag
ccgattgccgagctcgacccggccctggccgtgggcgatgtggtaccgctgggctgggag
gtggagcacgcccgcgcgctcgatccgattgccgaagcccattga
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