Pseudomonas plecoglossicida: RK21_04872
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Entry
RK21_04872 CDS
T03646
Name
(GenBank) sensor histidine kinase
Organism
ppj
Pseudomonas plecoglossicida
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_16
HATPase_c
GAF
Pkinase
GAF_2
nSTAND1
HisKA
PK_Tyr_Ser-Thr
DUF815
AAA_22
HATPase_c_5
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AJG16380
UniProt:
A0A0B5KJ20
LinkDB
All DBs
Position
5108257..5113305
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AA seq
1682 aa
AA seq
DB search
MLDERLAHRPIDYDQSVDEGWLNRCDINALGQEGELSYFRLRDPATDQAWIAVRAPREVP
AACQRLERDYRLQLDPQWAVIPSAFVRSAEGPLLVYPAGRSIADLIAEGPAALAPFLEIA
VNAATALAQAHERNVLHGALQPEHVCLRADQRVRLGCFRADPAELISEQGTPLGNWAYLA
PEQVCPHGSSSDRRTDIYALGAILYQLLLGELPLAGRDTQHWRQLHAGVQPRAACEVDSN
VPQPLSRILAKALAKEPDARYQSARALAVDLAYCQRQWAASKSMEAFEPGCADPMTPDRA
RLYGRSAEQMAIALLLKAQRRDSKPQALFINGATGMGKSSLVEAALRANAQGYWAIGKCN
GVAQALPYAPWVEILGALTTQLLAKNSQDLVALRCEILRRIKGHGRLLGKLAPDLQLILG
PLPELPAKPTRLALQKELRAIVEFLQVFIRPDQPLVLFFDDMHWVDDSSQQLLAQLLAHA
PGNLLLIFARRSDAPASSTPLALPAAVRSTTLNLRPLAVSAVTELIGERYHVGPEDALQV
AELVHDKTAGNPFFINQILRAMVEDQLFTFDTQTMRWSWCLQAVARHRYSDNVADLMIHR
LVRLPEPQRDLLRVVSAAGSRCDERLLHQVLSQAPGEPLKALIGAGFLQPGQNGLGFAHE
RVMEAAYALTPARARAQLHARIAQAMRQAWPGRLHEVLFELANQLQRASPCGFAADDCEA
FLQLLREAAARARDGGAFEQSAGYLHTAEQLLQRGATLESRATHGFAIACMATECDMQLS
RMVAAEARITECRLRARSALDQARVCRLQALLYTLRGDYQAAIDSAISGLDLLGMSPVRG
VDWQQVEASHAHVQTLVEQKGRHCLESLQRTDSEEVTVAISLLATLSSSFFVKDDICFLH
LAKLMELSLLHGVAPGSTYGMAWYGVMIAERFGAYHDGHACCLAALKLIERHGFDADLTS
ALLALDQVSAWTSPMEFARRTALDAVDSGRLSGDLAMSCYACNHLVSDSLFMGRYLPDVV
EELAQGLATVRHYGYRDIEQILQAQQAFVAKLSCTPCPASATASKSPTTRFFQYLMAGMG
DFYLGNIPQAMRNLALAGDNTWAVPAHINLADYHLFRGLALGSPEAIGSLADKLRELHAL
RERFGRWAGFNPATFRNKLLLIEGVIAKLEGDGLAAIRCFDQAQIAATAAGFIHEQALAH
EQLAEVCIPSGLISGANLPLRIARDCFHIWGATGKVHQLEALHPFLRTQPIQESQRATHQ
AKLDLEAGIEAARALSEEVLLEGLIETLMGHLTQHSGADHGALLIVSGAEFQMAALAYID
DAGLHVSMDDCQKFMTQAPLSIINATMRTKKPLVFNDAQSDCPEAFRQQLQARKARSVLC
LPLVIQGVLIGLVYLENRLVPNLFGGQRLAMLEILASQAAVSLQTAKFYTRLAEDNQTRA
QMETELRRSRAELARTSHLQVMNELSASIAHEISQPLLGIASNAAASLRWLKRAKPDLEE
AIAGLEDIRNDSERAANIVRALRSLAKQSPMQLKVVKLDELIREVVRLTSADAAKGPVDV
QMRLQAGVSVMADPVQLQQLVFNLITNGLEALAGYRSDGVLRIASVVVGNEVEICVDDNG
PGIAADERERVFDAFHTTKIGGMGMGLAICNSVVQAHGGQLQAQVSELGGCRIRFTLPVN
PS
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatgaacgccttgcccacaggcccatcgattacgaccagtccgtcgacgagggt
tggctgaaccggtgcgacatcaacgcgctgggccaggaaggtgaactcagttacttccgc
cttcgcgatccagccaccgaccaggcatggatcgccgtgcgcgccccgcgcgaggtcccc
gccgcctgccagcgcctggaacgcgactaccgcctgcaactcgacccgcaatgggcggtg
atcccctcggcgttcgtgcgctcggccgaaggccccctgctggtgtacccggccggccgc
tccatcgccgaccttatcgcagagggccctgccgccctggcgccgtttctcgagattgcg
gtgaatgcagccactgccttggcccaggcacacgaacgcaatgtgctgcacggcgcgctg
cagcccgaacatgtgtgcctgcgcgcggaccagcgagtgcgactgggctgctttcgcgcc
gacccggcggaactgatcagtgaacaaggcaccccgctcggcaactgggcttacttggcg
cctgaacaggtctgcccgcacggcagcagcagcgaccgacgcaccgacatctatgccctg
ggcgcgatcctttaccagctactgctgggcgaattgcctctggccgggcgcgacacccag
cactggcgccagctgcatgccggcgtgcagccacgagcggcctgcgaagtggacagcaat
gtgccgcaacctctcagccggatcctggccaaggccttggccaaagagccggacgcccgc
taccagagtgctcgcgccctggcggtggacttggcctattgccagcgacagtgggccgcc
agcaagtccatggaggccttcgaaccaggctgtgccgacccgatgacgcccgaccgcgca
cgcctgtatggccgcagtgccgaacagatggccatcgccctgctgctcaaggcacagcgc
cgtgacagcaagccacaagccctgttcatcaacggggctacgggcatgggcaagtcgagc
ctggtcgaggcagcgctcagggccaacgcccagggttactgggccatcggcaagtgcaac
ggcgttgcacaggccttgccctacgcgccctgggtcgaaattctcggcgcgctgaccacc
cagttgctggccaagaacagccaggacctcgtcgccttgcgctgcgagattctgcgccgt
atcaaaggccacggccggctgctcggcaagctggcaccagacctgcaactgatcctcggc
cccttgcccgagttgccggccaagcccacgcgtctggcgctgcagaaggagttgcgggcg
atcgtcgaattcctgcaggtattcatccgccccgaccagccgctggtgctgttcttcgat
gacatgcattgggtcgacgactccagccagcaactgctggcgcaacttctggctcacgcg
cccggcaacctgttgctgatcttcgcccggcgcagtgatgcgccagccagtagtacaccc
cttgccctgcccgcagcggtgcgcagcaccacgctgaacctgcggcccctggcggtgagc
gcggtgaccgagttgatcggcgagcgctaccacgtcggccccgaggacgcattgcaggtg
gccgaactggtacacgacaagactgcgggcaatccgttcttcatcaatcagatcctccgg
gccatggtcgaggaccagctgttcaccttcgatacccagaccatgcgctggtcatggtgc
ctgcaggccgtggcccgccaccgctattccgacaatgtcgccgacctgatgatccaccgc
ctggtgcgcctgcccgagccgcagcgcgacctgctgcgggtggtcagtgcggctggcagc
cgctgtgatgaacgcctgcttcaccaggtactctctcaagcgcccggcgagccgttgaaa
gccttgattggcgcgggtttcctgcaaccgggccagaacggcctgggtttcgcccatgaa
cgggtgatggaagctgcgtacgctctcacgccagcgcgcgcacgtgcccaactgcatgca
cgtattgcccaggccatgcgccaggcctggccggggcgcctgcacgaggtactgttcgag
cttgccaaccagctgcaacgcgccagcccatgcgggtttgcagcggatgactgcgaagct
tttctgcagcttttacgcgaggcagcagcacgcgcacgcgatggcggcgcgttcgaacaa
tcggctggctacctgcacacggccgagcagttgctgcaacgcggcgcaacgctggaaagc
cgcgccacgcatggctttgccatcgcctgcatggccaccgagtgcgacatgcaactgtcg
cgaatggtcgcggccgaggcccgcatcactgaatgccgcctgcgcgcgcgctcggcgttg
gaccaggcgcgggtatgccgcctgcaggcgctgctgtacaccttgcgcggcgactatcag
gcggccatcgacagcgccatttccggcctggacttgctgggtatgagcccggtgcgaggt
gtcgactggcaacaggtcgaagccagtcatgcccatgtacagaccttggtcgaacagaaa
ggccgacactgcctggaatcgctgcagcgcaccgattcggaggaagtgacagttgccatc
agcctgctggccaccctgtcgtcatcgtttttcgtaaaggacgacatctgcttcctgcac
ctggccaagctcatggagctgtcactgctgcacggcgtcgccccgggcagcacctacggc
atggcctggtacggggtgatgattgccgagcgcttcggtgcctaccatgatggccacgct
tgctgcctggctgcgctcaagctgatagagcggcacggtttcgacgctgacttgaccagc
gcgctgctggccctggaccaggtcagcgcctggacctcgcccatggagttcgcccgccgt
accgcactggatgcggtcgactcggggcgcctgagcggcgacctggcgatgagctgctat
gcctgcaaccacctggtttccgattcgctgttcatgggccgctacctgccggacgtggtg
gaggaactggcgcaaggcctggccaccgtgcgtcactacggttaccgcgacatcgagcag
atcctgcaggcccagcaagcgttcgtcgccaaattgagctgcacgccctgcccggcctcg
gccacagcctcgaaatcgcccaccacgcggttcttccaatacctcatggccggcatgggc
gacttctacctgggtaacatcccgcaggccatgcgcaacctggcactggccggggacaac
acctgggcggtaccagcgcacatcaacctggccgactatcacctgttccgcggcctggcc
ctgggcagccccgaggccattggcagccttgccgacaagctgcgcgaactacacgccctg
cgcgagcgcttcggccgctgggccggcttcaacccggccaccttccgcaacaagctgttg
ctgatcgaaggcgtgatcgccaagctcgaaggcgacggcctggccgccatccgctgcttc
gaccaggcacagatcgccgccaccgccgccggtttcatccacgagcaggcgctggcccac
gaacagctggccgaggtatgcatccccagcggcctgatctccggcgccaacctgcccctg
cgcatcgcccgcgactgtttccatatctggggcgcgaccggcaaggtgcaccagctggag
gcgttgcacccgttcctgcgcacccagccaatccaggaaagccaacgcgcaacccaccag
gccaagctcgacctggaagccggcatcgaggcagcacgggcgctgtccgaggaagtgctg
ctcgaaggccttatcgaaaccctgatgggccacctgacccagcattccggggccgaccac
ggtgcgctgctgatcgtcagcggtgccgaattccagatggctgccctcgcctacatcgac
gatgccgggctgcacgtgagcatggacgactgccagaagttcatgacccaggcaccgctg
tcgatcatcaacgccaccatgcgcaccaagaagcccctggtgttcaacgatgcccagagc
gattgccccgaggccttccgccagcagttgcaggcgcgcaaggcccgttcggtgctgtgc
ctgccgctggtgatccagggcgtgctgatcggcctggtgtacctggaaaaccgcctggtg
ccgaacctgttcggcggccagcgcctggccatgctggaaatactcgcctcacaggcggcg
gtgtcgctgcaaaccgccaagttctacacacgcctggccgaagacaaccagacccgcgcc
cagatggagaccgagttgcgccgctcccgcgcggaattggcccgcacgtcgcacttgcag
gtgatgaacgagctgtccgcgtccatcgcccatgagatcagccagccgctgctgggcata
gcctccaacgccgctgccagcctgcgctggctgaagcgcgccaagcccgacctggaagag
gcgattgccggcctggaagacatccgcaacgacagcgaacgggccgccaacatcgtgcgt
gcgctacgctcgctggccaaacagtcgccgatgcaactcaaggtggtgaagctggacgag
ttgatccgcgaagtggtgcgccttacatcggccgatgccgccaagggcccggtggacgtg
cagatgcgcttgcaggcgggggtgagcgtgatggccgacccggtgcagttgcagcagttg
gtgttcaacctgattaccaatggcctggaggcgctggcggggtatcgcagcgacggggtg
ctgcggattgcgtcggtggtggtcgggaatgaggtggaaatctgcgtggacgacaacggg
ccggggattgcagcggatgagcgcgagcgagtgttcgatgcgtttcataccaccaagatc
ggcggcatggggatgggcttggcgatctgcaactcggtggtgcaggcccatggagggcag
ttgcaggcgcaggtgtcggagctgggggggtgtcggattcgctttacgctgcctgtgaat
ccttcttga
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