Pseudomonas plecoglossicida: RK21_05100
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Entry
RK21_05100 CDS
T03646
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppj03016
]
RK21_05100
Transfer RNA biogenesis [BR:
ppj03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
RK21_05100
Prokaryotic type
Methyltransferases
RK21_05100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
Ras
RsgA_GTPase
ABC_tran
AAA_28
SRPRB
Roc
Motif
Other DBs
NCBI-ProteinID:
AJG16608
UniProt:
A0A099N6Q1
LinkDB
All DBs
Position
complement(5343157..5344527)
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AA seq
456 aa
AA seq
DB search
MNTVRETIAAIATAQGRGGVGIVRLSGPLAAKAGQLITGRTLTPRHAHYGPFRDEEGLVL
DEGIALFFPGPNSFTGEDVLELQGHGGPVVLDMLLQRCVQVGCRLARPGEFSERAFLNDK
LDLAQAEAIADLIEASSSQAARNALRSLQGEFSKRVHFLTEALIALRIYVEAAIDFPEEE
IDFLADGHVLAMLDTVRGELSKVQREAGQGALLRDGMTVVIAGRPNAGKSSLLNQLAGRE
AAIVTDIAGTTRDILREHIHIDGMPLHVVDTAGLRDTDDHVEKIGVERALKAIGEADRVL
LVVDSTAPEASDPFALWPEFLDQRPDPAKVTLIRNKADLSGERVALEQCDDGHVTITLSA
KGDDAGLQLLRDHLKACMGYEQTAESGFSARRRHLDALRQASEHLEHGRAQLTLAGAGEL
LAEDLRQAQQALGEITGAFSSDDLLGRIFSSFCIGK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgtgcgtgaaaccatcgccgccatcgccaccgcccagggccgcggcggtgtg
ggtattgtcaggttgtccggccctctggccgccaaggccggccagttgatcaccggccgt
acgcttaccccgcgccacgcccattacggcccgttccgcgacgaggaaggcctggtactg
gatgaagggatcgcgctgtttttccccgggccgaattcgttcaccggcgaggacgtgctg
gaactgcagggccatggtggcccggtggtactggatatgctgctgcagcgctgtgtacag
gttggttgccggctggctcgcccgggtgagttcagcgaacgtgcattcctcaacgacaag
ctcgacctggcccaggccgaagccattgccgatctgatcgaagccagttccagccaagct
gcgcgcaatgccctgcgttcgctacagggggagttctccaagcgcgtgcacttcctgacc
gaggcgttgattgcgctgcgcatctacgtcgaggcggcgatcgacttccctgaagaggaa
atcgacttcctcgccgacggccatgtgctggcgatgctcgatacggtgcggggcgagttg
tccaaagtacagcgtgaagccgggcagggggctttgctgcgtgacggcatgactgtggtc
atcgccggtaggccgaatgccggcaagtcgagcctgctgaatcagctggccggtcgggaa
gcggccatcgtgactgatattgccggcaccacgcgagacatcctgcgcgaacatatccac
atcgacggcatgccgctgcacgtggtcgatactgccggtttgcgcgacaccgatgaccat
gtggaaaagattggcgtggaacgtgcgctgaaggccattggcgaggcagatcgggtgttg
ttggtggtggattccaccgcgcccgaggccagcgacccgttcgccctgtggccagaattt
ctcgaccagcggccagacccggccaaggtgacgctgattcggaacaaggccgaccttagt
ggtgagcgggtagcgctggaacagtgcgatgacggccatgtaacgatcaccctcagtgcc
aaaggggacgatgcagggctgcagttgctgcgtgaccacctgaaggcctgcatgggttat
gaacagacggcggagagtggtttcagcgctcgccggcgccatctggatgccctgcgccag
gccagtgagcacctggaacatggccgtgcacaactgaccctggctggtgcgggtgagctg
ttggcggaagacctgcggcaggcgcagcaggccctgggggagattaccggggcattcagc
tctgatgacctgctggggcggattttctccagcttttgcatcggcaagtaa
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