Pseudomonas plecoglossicida: RK21_05453
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Entry
RK21_05453 CDS
T03646
Name
(GenBank) choline dehydrogenase
KO
K00108
choline dehydrogenase [EC:
1.1.99.1
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00260
Glycine, serine and threonine metabolism
ppj01100
Metabolic pathways
Module
ppj_M00555
Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RK21_05453
Enzymes [BR:
ppj01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.1 choline dehydrogenase
RK21_05453
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Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
FAD_binding_2
DAO
Pyr_redox_2
NAD_binding_8
Lycopene_cycl
Thi4
TrkA_N
FAD_binding_3
ApbA
Motif
Other DBs
NCBI-ProteinID:
AJG16961
UniProt:
A0A099N830
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Position
complement(5740610..5742307)
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AA seq
565 aa
AA seq
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MSQEFDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGR
RYNWAYETDPEPYMDGRRMECGRGKGLGGSSLINGMCYIRGNALDFDGWAELPGLEDWTY
LDCLPYFRKAETRDIGPNDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRTEDLNG
YQQEGFGPMDRTVTKNGRRSSTARGYLDQAKKRPNLTIVTHALTDRVLFDGKRAIGVTYL
VGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLPGVGENLQD
HLELYLQYACTQPVSLYPSLLWWNQPAIGAEWMFNGTGIGASNQFEAGGFIRTRPEFKWP
NIQYHFLPVAINYNGSNGVKEHGFQAHMGSMRSPARGRIQAKSKDPRQHPSILFNYMSTE
QDWQEFRDGIRLTREIMAQPALDPYRGREISPGAHVQTDEELDKFIREHAETAFHPSCSC
KMGTDDMAVVDGEGRVHGMKGLRVVDASIMPLIITGNLNATTIMIAEKISDKIRGRKPLP
RSTAKYYVAGDAPVKGKPMREVKQA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagaattcgattacatcatcgtcggtgccggttcggccggtaacaccctggcg
acccgcctgaccgaagacgcaggcgtcaccgtattgctgctggaagccggtggccccgac
taccgcttcgacttccgcacccagatgccagcagccctggccttcccgctgcagggccgc
cgctacaactgggcctacgagaccgatccggagccgtacatggacggccgccgcatggaa
tgcggtcgcggcaaaggcctgggtggctcgtcgctgatcaacggcatgtgctacatccgc
ggtaatgccctggacttcgatggctgggcagaactgccaggcctggaagactggacctat
ctggactgcctgccgtacttccgcaaggccgaaacccgcgacatcggcccgaacgactac
cacggtggcgaaggcccggtcagcgtgaccacgccgaaagccggcaacaacccgctgttc
cacgccatggtcgaagccggcgtgcaggccggttacccgcgcaccgaagacctgaatggc
taccagcaggaaggcttcggcccgatggaccgtacggtgaccaagaacggccgccgctcc
agcaccgcccgcggctatctggaccaggccaagaagcgcccgaacctgaccatcgtcacc
cacgccctgactgaccgcgtgctgttcgacggcaagcgcgccatcggcgtgacctacctg
gtcggtgacagcgaagagcgcgttgaagcccgtgcccgcaaggaagtcatcgtcagctcc
ggcgccatcgcttcgccgcagctgttgcagcgctccggcgttggtccgcgcgccctgctg
gaaagcctcgacatcccggtggtgcacgatctgccaggcgttggcgaaaacctgcaggac
cacctggagctgtacctgcagtacgcctgcacccaaccggtgtcgctgtacccatcgttg
ctgtggtggaaccagccggccatcggtgccgagtggatgttcaacggcaccggcatcggc
gccagcaaccagttcgaggccggtggtttcattcgtacccgccctgaattcaaatggccg
aacattcaatatcacttcctgccagtggccattaactacaacggctccaatggcgtgaag
gaacacggcttccaggcacacatgggttccatgcgctcgcctgcccgcggccgcatccag
gccaagtcgaaggacccgcgccaacacccgagcattctgttcaactacatgtccaccgag
caggactggcaggaattccgtgacggcatccgcctgacccgtgaaatcatggcccagccg
gcactggacccgtaccgtggccgtgagatcagccccggcgcgcacgtgcagaccgatgaa
gagctggacaagttcatccgcgagcacgccgaaaccgccttccacccgtcctgctcgtgc
aagatgggcaccgacgacatggcggtggtcgacggcgaaggccgcgtgcatggcatgaag
ggcctgcgtgtggtcgatgcgtcgatcatgccgctgatcatcaccggtaacctcaacgcc
accacgatcatgatcgccgagaaaatctcggacaagatccgtggccgcaagccgctgccg
cgcagcactgccaagtactacgtggcgggcgatgcaccggtgaagggcaagccgatgcgc
gaggtcaagcaggcgtaa
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