Pseudomonas plecoglossicida: RK21_05601
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Entry
RK21_05601 CDS
T03646
Name
(GenBank) toxin secretion ABC transporter protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj02010
ABC transporters
ppj03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RK21_05601
03070 Bacterial secretion system
RK21_05601
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppj02000
]
RK21_05601
02044 Secretion system [BR:
ppj02044
]
RK21_05601
Transporters [BR:
ppj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RK21_05601
Secretion system [BR:
ppj02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
RK21_05601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
AAA_16
AAA_29
AAA_21
DUF87
AAA_22
NB-ARC
AAA_30
RsgA_GTPase
MMR_HSR1
PRK
Motif
Other DBs
NCBI-ProteinID:
AJG17109
UniProt:
A0A0B5KEP8
LinkDB
All DBs
Position
5910711..5912618
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AA seq
635 aa
AA seq
DB search
MPDLTCGCNTSAIESGLVCLITLARYHDIAVSAEQLQHDHAPAGERFSTGAILRAFQQLG
LKAKHCSIDPNRLKHAPLPAIAVDTRGEYFIIARAEGEQVLVQDPGSRAPQALTSAELAM
RWSGELILVRSDAQLPHGLSRFDLTWFIPAVVKYRRLFGEVLVVSLVIQILALLTPLFFQ
VVMDKVLVHRGLTTLDVIALGLLVVVLFETLLSGLRTYVAAHTASRIDVELGARLFRHLI
DLPAAYFQARRVGDSVARVRELENIRSFLTNNSITLLLDVVFTVVFIAVMFLYSGWLTLV
VVGSLPLYFLVSLVVTPLLRARIDQSFQRGAENQAFLVEAVNGIDTLKSMAVEPQITRRW
NNQLAAYVSASFKTQNLSNLANESVGLIGKLVTVATLWLGARLVIDGELTVGELIAFNML
AGRVSQPIIRLAQLWTSFQQTGVSIQRLGDILNTRTEVNQGKGTVLPALAGQIELDRVCF
RYRPDGGEVVRDVSLKIAAGEVVGIVGRSGSGKSTLTRLIQRLYSPERGRVLLDGADLAV
ADVASLRRQIGVVLQENVLFRRTVRENIALGNPAAPLEEVIAAATLAGAHEFILELPDGY
ETLVGEHGASLSGGQRQRIAIARALFGNPRILIFD
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgatttgacttgtgggtgtaataccagcgctattgaaagtgggctggtctgtctg
atcacgctggcgcgttatcatgatatagccgtctctgccgagcagttgcagcacgaccat
gcaccggcgggtgagcgattctcgactggcgcaatactccgggcatttcagcaactaggt
ctcaaggccaagcattgcagcatcgatccgaatcggcttaagcatgcgccattgcctgcc
attgccgtggatacgcgtggtgagtatttcatcatcgctcgcgcggaaggtgagcaggtt
ctggtgcaagacccaggttcccgtgcaccgcaagcgctgacctcggcagaacttgccatg
cgctggtcgggagaactcattctggttcgctccgatgcccagttgccgcatgggctgtcg
cgtttcgatctgacctggttcattccagccgtggtgaagtacaggcggctatttggcgaa
gtgcttgttgtctccttggtcattcagatattggcgttgctgacacctctgttcttccaa
gtggtaatggacaaagtactggtgcatcgtgggttgaccacactggatgttatcgccctg
ggcttgttggtcgtggttctatttgaaacattgctgagtggtttgcgtacttatgtggca
gctcatacagcgtcaaggattgatgtcgaactaggtgcaagactgttcaggcacttgatc
gatcttcccgccgcctactttcaggccaggcgagtcggtgactcggttgcccgagtacgc
gaactggagaacatcagaagtttcctgaccaacaacagtatcacgctgttgctagatgta
gtgttcacggtggtcttcatcgctgtcatgttcctttatagcggttggttgacgttggtg
gtcgtcggctcattgcctctatattttctcgtatccttggtcgttaccccactgctacgg
gcgcggatcgaccagagtttccagcgcggcgccgagaatcaagcatttctggtggaggcg
gtgaacggcatcgatacgctgaagtcgatggccgtggaaccgcagattacccggcgctgg
aacaatcagttggctgcttatgtatcggccagcttcaagacccagaacctttccaacctc
gcgaatgagagcgtaggcctgatcggcaagctggtcacggtcgccacgttgtggctgggt
gcccgcctagtcatcgatggcgaactcacggtgggcgaactgatcgccttcaacatgctg
gcagggcgcgtctcgcaacccattatccggctggctcaactctggaccagcttccagcag
acaggcgtatcgattcaacgcctgggcgacattctcaacacccgtaccgaggtcaaccag
ggcaagggtacggtgctgccagcactagccgggcagatcgagctcgatcgtgtgtgtttt
cgctaccggccggacgggggcgaagtcgtgcgcgatgtcagcctgaagattgctgccgga
gaagtggttggcattgtaggtcgctcggggtcaggcaagagtacgctgacacgcctgatc
cagaggttgtactcacccgagcgggggcgggtattgctcgacggtgctgacttggcggta
gccgatgtggcttcactgcgtcggcagatcggtgtggtgctacaggagaacgtgcttttt
cggcgcaccgtgcgcgagaacatcgcccttggcaacccggcggcaccgcttgaagaggtc
atcgccgcagcgacgctggcgggggcccacgagttcatcctcgaattgccggatggctat
gaaaccttggtcggcgagcacggtgccagcctgtcaggtggccagcgacagcgcattgcc
atcgcccgggcgctgttcggcaacccacgcatcctgattttcgactag
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