Pandoraea pnomenusa 3kgm: U875_01560
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Entry
U875_01560 CDS
T02936
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk00470
D-Amino acid metabolism
ppk00550
Peptidoglycan biosynthesis
ppk01100
Metabolic pathways
ppk01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
U875_01560
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
U875_01560
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
U875_01560
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppk01011
]
U875_01560
Enzymes [BR:
ppk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
U875_01560
Peptidoglycan biosynthesis and degradation proteins [BR:
ppk01011
]
Precursor biosynthesis
Amino acid ligase
U875_01560
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp
ATPgrasp_ST
ATP-grasp_4
TTL
GARS_A
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
AHB04234
LinkDB
All DBs
Position
334148..335131
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AA seq
327 aa
AA seq
DB search
MSAFDPKRFGKVGVLMGGRSAERQISLISGKGVLEALRSKGVDAHGFDTGMNDLAALAAQ
KFDRVFIALHGRYGEDGTLQGALEHLGIPYTGSGVLASALAMDKEMTKRVWINEGLPTPR
FKMLDADSDFDAVARDLGLPLIVKPSREGSTIGLTKVTEASQLKAAYEKAAALDPDVLAE
EFIDGDELTVPVLGVGTKGAAAARALPVIRIVAPDANYDYQNKYFKDDTRYECPPPLSVS
LQEEVQRLVLRAYLVLGCRGWARADVMLRKRDNKPYLLEINTSPGMTGHSLVPISARAAG
LSYEDLVVEILATATLDLHPNAQWKPE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgcattcgatccgaaacgtttcggcaaggttggcgtcctgatgggcgggcgctct
gccgagcgtcagatctcgctgatttcgggcaaaggcgtactcgaggcgctgcgcagcaag
ggcgtggacgcccacggtttcgataccggcatgaacgatctggcggcgctggccgcgcag
aagttcgaccgcgtgttcattgcgctgcatgggcgctacggcgaggacggcacgctgcag
ggtgcgctcgagcatctcggcattccctacaccggcagtggcgtgctcgcctcggcgctg
gcgatggacaaggaaatgaccaagcgcgtgtggatcaacgaaggcctgcccacgccgcgc
ttcaagatgctcgacgccgacagcgacttcgacgccgtggcgcgcgatctcggcctgccg
ctgatcgtcaagccgtcgcgcgaaggctcgaccatcggcctcacgaaggtcacggaagcg
tcgcagctcaaggcggcctacgagaaggctgccgcgctcgatcccgacgtgctcgccgag
gagttcatcgatggcgacgagctgaccgtgccggtgttgggcgtgggcacgaagggcgcg
gccgccgcgcgcgcgctgccggtgatccgcatcgtggcgccggacgcgaactacgactat
cagaacaagtacttcaaggacgacacgcgctacgagtgcccgccgccgttgtcggtgtcg
ttgcaggaggaagtgcagcgcctcgtgttgcgcgcctacctggtgctgggatgccggggc
tgggcgcgagccgacgtgatgctgcgcaagcgcgacaacaagccgtacctgctggaaatc
aatacgtcgccgggcatgaccggtcactcgctggtgccgatctcggcacgtgcggcgggc
ctgtcgtatgaagacctggtcgttgaaatcctggcaaccgcgacgctcgatctgcatccg
aacgcgcagtggaagccagagtga
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