Pandoraea pnomenusa 3kgm: U875_13140
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Entry
U875_13140 CDS
T02936
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk00470
D-Amino acid metabolism
ppk01100
Metabolic pathways
ppk01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
U875_13140
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
U875_13140
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppk01011
]
U875_13140
Enzymes [BR:
ppk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
U875_13140
Peptidoglycan biosynthesis and degradation proteins [BR:
ppk01011
]
Precursor biosynthesis
Racemase
U875_13140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
AHB06203
LinkDB
All DBs
Position
complement(2872150..2873220)
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AA seq
356 aa
AA seq
DB search
MPRPIKVSIHTAALAHNLDVARRHAPHAKVWAVVKANAYGHGIENAYPGLRDADGFGLLD
LDEAVRLRELGWAGPILLLEGFFKPEDLAVVDKYGLTTTVHCDEQLRMLETTRLTKPLNV
QLKMNSGMNRLGFAPERFRAAWERARAIPGVSQIVLMTHFSDADGPRGIAYQMEAFERGA
CDVPGERSLANSAATLFHPGTHGAWVRPGIMLYGSSPKGVDVPAAELDLQPTMTLEAELI
GTQEVPAGGSVGYGSLFRADAPMRVGTVACGYADGYPRVAPTGTPVLVDGVRTRTVGRVS
MDMLAVDLTPVPQARVGTPVTLWGRGLSIDEVAASAGTLGYELMCAVTRRVPVHAN
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtccgatcaaagtctccattcacaccgcagcgctcgcccataatctcgatgtc
gcccgccgccacgcgccccacgccaaggtctgggcggtggtcaaggccaacgcctacggg
cacggcatcgagaacgcctatcccgggttgcgcgacgccgatggcttcggcctgctcgac
ctcgacgaggccgttcggcttcgcgagctcggatgggccggcccgattctgctgctggag
ggctttttcaagcccgaggatcttgccgtcgtcgacaagtacggcctgacgaccacggtg
cactgcgacgagcagctgcgtatgctcgagaccacgcggctgaccaagccgctcaacgtg
cagctcaagatgaactccggcatgaaccgcctggggttcgcgccagagcgttttcgtgcc
gcatgggagcgcgcccgtgcgattcccggcgtgagccagatcgtgttgatgacgcacttc
tcggatgccgacggtccgcgcggcatcgcctatcagatggaggcgttcgagcgcggcgcc
tgcgacgtgccgggcgagcgcagcctggccaactcggcggccaccttgtttcatccgggc
acgcatggcgcctgggtgcgcccgggcatcatgctctacggttcctcgcccaagggcgtc
gacgtgcctgcggcggaactcgatctgcaacccacgatgacgctcgaagccgagctgatc
ggtacccaggaagtgccggccggcggctcggtcggctacggcagcctgttccgcgccgat
gcgccgatgcgcgtgggcacggtggcctgtggctacgccgatggctatccgcgcgtcgcg
cccacgggcacgcccgtgctggtcgacggggtgcgtacgcgcacggtggggcgcgtctcg
atggacatgctcgcggtcgatctcacgccggtgccgcaggctcgcgtcggcacgccggtc
acgctctggggccgtggcctgagcatcgacgaagtggcggcctcggcgggcacgctcggc
tacgagctcatgtgcgccgtgacgcgccgcgtgccggtgcacgcgaactga
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